Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb1P63158 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb1P63158 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Hmgb1P63158 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hmgb1P63158 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb1P63158 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb1P63158 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb1P63158 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb1P63158 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.89□□□□□ -0.03
Hmgb1P63158 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Hmgb1P63158 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC14.89□□□□□ -0.03
Hmgb1P63158 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Hmgb1P63158 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb1P63158 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.89□□□□□ -0.03
Hmgb1P63158 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb1P63158 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb1P63158 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb1P63158 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb1P63158 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb1P63158 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb1P63158 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Hmgb1P63158 AC154532.1-201ENSMUST00000227860 965 ntBASIC14.89□□□□□ -0.03
Hmgb1P63158 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb1P63158 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb1P63158 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb1P63158 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb1P63158 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Hmgb1P63158 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb1P63158 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb1P63158 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb1P63158 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Hmgb1P63158 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb1P63158 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb1P63158 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb1P63158 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb1P63158 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb1P63158 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Hmgb1P63158 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hmgb1P63158 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hmgb1P63158 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.88□□□□□ -0.03
Hmgb1P63158 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hmgb1P63158 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hmgb1P63158 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.88□□□□□ -0.03
Hmgb1P63158 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hmgb1P63158 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hmgb1P63158 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hmgb1P63158 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.88□□□□□ -0.03
Hmgb1P63158 Gm15240-201ENSMUST00000118156 720 ntBASIC14.88□□□□□ -0.03
Hmgb1P63158 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.88□□□□□ -0.03
Hmgb1P63158 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Hmgb1P63158 Gm38294-201ENSMUST00000192831 381 ntBASIC14.88□□□□□ -0.03
Hmgb1P63158 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hmgb1P63158 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hmgb1P63158 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hmgb1P63158 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hmgb1P63158 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Hmgb1P63158 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.88□□□□□ -0.03
Hmgb1P63158 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hmgb1P63158 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hmgb1P63158 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hmgb1P63158 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.88□□□□□ -0.03
Hmgb1P63158 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hmgb1P63158 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hmgb1P63158 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hmgb1P63158 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb1P63158 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb1P63158 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb1P63158 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb1P63158 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb1P63158 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb1P63158 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb1P63158 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb1P63158 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb1P63158 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb1P63158 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb1P63158 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Hmgb1P63158 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb1P63158 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb1P63158 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.87□□□□□ -0.03
Hmgb1P63158 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb1P63158 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Hmgb1P63158 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.87□□□□□ -0.03
Hmgb1P63158 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Hmgb1P63158 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Hmgb1P63158 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb1P63158 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.87□□□□□ -0.03
Hmgb1P63158 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.87□□□□□ -0.03
Hmgb1P63158 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb1P63158 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb1P63158 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb1P63158 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.87□□□□□ -0.03
Hmgb1P63158 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb1P63158 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb1P63158 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb1P63158 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb1P63158 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb1P63158 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb1P63158 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.87□□□□□ -0.03
Hmgb1P63158 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgb1P63158 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms