Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tpm1P58771 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Tpm1P58771 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Tpm1P58771 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Tpm1P58771 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tpm1P58771 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Tpm1P58771 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Tpm1P58771 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Tpm1P58771 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Tpm1P58771 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.06■□□□□ 0
Tpm1P58771 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tpm1P58771 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Tpm1P58771 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.06■□□□□ 0
Tpm1P58771 AC154747.3-201ENSMUST00000224471 3470 ntBASIC15.06■□□□□ 0
Tpm1P58771 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tpm1P58771 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Tpm1P58771 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.06■□□□□ 0
Tpm1P58771 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tpm1P58771 Gm37714-201ENSMUST00000194742 342 ntBASIC15.06■□□□□ 0
Tpm1P58771 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tpm1P58771 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.06■□□□□ 0
Tpm1P58771 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
Tpm1P58771 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tpm1P58771 Gm45453-201ENSMUST00000211758 853 ntBASIC15.06■□□□□ 0
Tpm1P58771 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tpm1P58771 Mzt1-203ENSMUST00000227948 952 ntBASIC15.06■□□□□ 0
Tpm1P58771 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Tpm1P58771 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tpm1P58771 Gm8775-201ENSMUST00000170943 1327 ntBASIC15.06■□□□□ 0
Tpm1P58771 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tpm1P58771 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Tpm1P58771 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tpm1P58771 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tpm1P58771 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tpm1P58771 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tpm1P58771 Gm13730-201ENSMUST00000121036 1462 ntBASIC15.06■□□□□ 0
Tpm1P58771 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tpm1P58771 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC15.06■□□□□ 0
Tpm1P58771 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tpm1P58771 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tpm1P58771 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Tpm1P58771 Gm45242-201ENSMUST00000210666 2129 ntBASIC15.05■□□□□ 0
Tpm1P58771 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Tpm1P58771 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Tpm1P58771 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Tpm1P58771 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ 0
Tpm1P58771 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Tpm1P58771 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Tpm1P58771 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Tpm1P58771 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Tpm1P58771 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.05■□□□□ -0
Tpm1P58771 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tpm1P58771 Gm12260-201ENSMUST00000122447 411 ntBASIC15.05■□□□□ -0
Tpm1P58771 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tpm1P58771 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.05■□□□□ -0
Tpm1P58771 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.05■□□□□ -0
Tpm1P58771 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tpm1P58771 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tpm1P58771 Mir125a-201ENSMUST00000083545 68 ntBASIC15.05■□□□□ -0
Tpm1P58771 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tpm1P58771 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.05■□□□□ -0
Tpm1P58771 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tpm1P58771 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
Tpm1P58771 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tpm1P58771 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC15.05■□□□□ -0
Tpm1P58771 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC15.05■□□□□ -0
Tpm1P58771 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tpm1P58771 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Tpm1P58771 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tpm1P58771 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tpm1P58771 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC15.05■□□□□ -0
Tpm1P58771 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tpm1P58771 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Tpm1P58771 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC15.05■□□□□ -0
Tpm1P58771 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC15.04■□□□□ -0
Tpm1P58771 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tpm1P58771 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Tpm1P58771 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC15.04■□□□□ -0
Tpm1P58771 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Tpm1P58771 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tpm1P58771 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Tpm1P58771 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tpm1P58771 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC15.04■□□□□ -0
Tpm1P58771 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Tpm1P58771 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.04■□□□□ -0
Tpm1P58771 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tpm1P58771 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tpm1P58771 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.04■□□□□ -0
Tpm1P58771 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.04■□□□□ -0
Tpm1P58771 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Tpm1P58771 Gm6443-201ENSMUST00000203599 874 ntBASIC15.04■□□□□ -0
Tpm1P58771 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.04■□□□□ -0
Tpm1P58771 Gm5364-201ENSMUST00000216789 889 ntBASIC15.04■□□□□ -0
Tpm1P58771 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.04■□□□□ -0
Tpm1P58771 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tpm1P58771 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tpm1P58771 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tpm1P58771 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tpm1P58771 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Tpm1P58771 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms