Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rrp1P56183 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rrp1P56183 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rrp1P56183 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rrp1P56183 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rrp1P56183 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
Rrp1P56183 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rrp1P56183 Gm15459-201ENSMUST00000117405 1941 ntBASIC15.25■□□□□ 0.03
Rrp1P56183 Gm8355-201ENSMUST00000177767 1941 ntBASIC15.25■□□□□ 0.03
Rrp1P56183 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rrp1P56183 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rrp1P56183 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rrp1P56183 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC15.25■□□□□ 0.03
Rrp1P56183 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Rrp1P56183 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rrp1P56183 AC137842.1-201ENSMUST00000227896 2064 ntBASIC15.25■□□□□ 0.03
Rrp1P56183 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Rrp1P56183 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rrp1P56183 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC15.25■□□□□ 0.03
Rrp1P56183 Gm15770-201ENSMUST00000117498 584 ntBASIC15.25■□□□□ 0.03
Rrp1P56183 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rrp1P56183 Gm6415-201ENSMUST00000118488 348 ntBASIC15.25■□□□□ 0.03
Rrp1P56183 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Rrp1P56183 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rrp1P56183 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rrp1P56183 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rrp1P56183 Gm27533-201ENSMUST00000183800 152 ntBASIC15.25■□□□□ 0.03
Rrp1P56183 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.25■□□□□ 0.03
Rrp1P56183 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rrp1P56183 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC15.25■□□□□ 0.03
Rrp1P56183 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rrp1P56183 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC15.25■□□□□ 0.03
Rrp1P56183 AC122314.1-201ENSMUST00000223056 2239 ntBASIC15.25■□□□□ 0.03
Rrp1P56183 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.25■□□□□ 0.03
Rrp1P56183 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Rrp1P56183 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rrp1P56183 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rrp1P56183 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rrp1P56183 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC15.24■□□□□ 0.03
Rrp1P56183 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rrp1P56183 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rrp1P56183 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rrp1P56183 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rrp1P56183 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.24■□□□□ 0.03
Rrp1P56183 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rrp1P56183 Gm6912-201ENSMUST00000117218 544 ntBASIC15.24■□□□□ 0.03
Rrp1P56183 Gm15393-201ENSMUST00000120499 219 ntBASIC15.24■□□□□ 0.03
Rrp1P56183 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rrp1P56183 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rrp1P56183 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rrp1P56183 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Rrp1P56183 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.24■□□□□ 0.03
Rrp1P56183 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rrp1P56183 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rrp1P56183 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rrp1P56183 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rrp1P56183 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rrp1P56183 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rrp1P56183 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rrp1P56183 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rrp1P56183 Gm5989-201ENSMUST00000096092 2077 ntBASIC15.24■□□□□ 0.03
Rrp1P56183 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rrp1P56183 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rrp1P56183 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rrp1P56183 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rrp1P56183 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rrp1P56183 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rrp1P56183 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rrp1P56183 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rrp1P56183 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rrp1P56183 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rrp1P56183 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rrp1P56183 Gm27194-201ENSMUST00000175753 2936 ntBASIC15.23■□□□□ 0.03
Rrp1P56183 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rrp1P56183 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rrp1P56183 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rrp1P56183 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rrp1P56183 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rrp1P56183 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rrp1P56183 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rrp1P56183 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rrp1P56183 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rrp1P56183 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Rrp1P56183 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.23■□□□□ 0.03
Rrp1P56183 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.23■□□□□ 0.03
Rrp1P56183 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.23■□□□□ 0.03
Rrp1P56183 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Rrp1P56183 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC15.23■□□□□ 0.03
Rrp1P56183 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC15.23■□□□□ 0.03
Rrp1P56183 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.23■□□□□ 0.03
Rrp1P56183 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC15.23■□□□□ 0.03
Rrp1P56183 Gm46209-201ENSMUST00000217912 553 ntBASIC15.23■□□□□ 0.03
Rrp1P56183 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rrp1P56183 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Rrp1P56183 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rrp1P56183 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rrp1P56183 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rrp1P56183 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rrp1P56183 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rrp1P56183 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms