Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdkn2bP55271 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdkn2bP55271 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdkn2bP55271 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cdkn2bP55271 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdkn2bP55271 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cdkn2bP55271 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.95□□□□□ -0.34
Cdkn2bP55271 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdkn2bP55271 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cdkn2bP55271 Gm8410-201ENSMUST00000117225 605 ntBASIC12.95□□□□□ -0.34
Cdkn2bP55271 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.95□□□□□ -0.34
Cdkn2bP55271 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.95□□□□□ -0.34
Cdkn2bP55271 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.95□□□□□ -0.34
Cdkn2bP55271 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.95□□□□□ -0.34
Cdkn2bP55271 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdkn2bP55271 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cdkn2bP55271 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdkn2bP55271 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.95□□□□□ -0.34
Cdkn2bP55271 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cdkn2bP55271 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdkn2bP55271 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Cdkn2bP55271 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdkn2bP55271 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Cdkn2bP55271 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Cdkn2bP55271 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdkn2bP55271 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdkn2bP55271 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cdkn2bP55271 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdkn2bP55271 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdkn2bP55271 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.94□□□□□ -0.34
Cdkn2bP55271 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Cdkn2bP55271 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdkn2bP55271 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cdkn2bP55271 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Cdkn2bP55271 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdkn2bP55271 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Cdkn2bP55271 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.94□□□□□ -0.34
Cdkn2bP55271 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdkn2bP55271 Mir449b-201ENSMUST00000104833 80 ntBASIC12.94□□□□□ -0.34
Cdkn2bP55271 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Cdkn2bP55271 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdkn2bP55271 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cdkn2bP55271 Gm12585-201ENSMUST00000117307 290 ntBASIC12.94□□□□□ -0.34
Cdkn2bP55271 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.94□□□□□ -0.34
Cdkn2bP55271 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdkn2bP55271 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdkn2bP55271 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cdkn2bP55271 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdkn2bP55271 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.94□□□□□ -0.34
Cdkn2bP55271 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdkn2bP55271 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdkn2bP55271 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdkn2bP55271 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdkn2bP55271 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdkn2bP55271 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdkn2bP55271 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.94□□□□□ -0.34
Cdkn2bP55271 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdkn2bP55271 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdkn2bP55271 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdkn2bP55271 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdkn2bP55271 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdkn2bP55271 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cdkn2bP55271 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdkn2bP55271 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdkn2bP55271 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Cdkn2bP55271 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.93□□□□□ -0.34
Cdkn2bP55271 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdkn2bP55271 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdkn2bP55271 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdkn2bP55271 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.93□□□□□ -0.34
Cdkn2bP55271 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdkn2bP55271 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdkn2bP55271 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdkn2bP55271 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdkn2bP55271 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Cdkn2bP55271 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdkn2bP55271 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdkn2bP55271 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdkn2bP55271 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdkn2bP55271 Mir874-201ENSMUST00000104769 76 ntBASIC12.93□□□□□ -0.34
Cdkn2bP55271 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.93□□□□□ -0.34
Cdkn2bP55271 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdkn2bP55271 Gm15240-201ENSMUST00000118156 720 ntBASIC12.93□□□□□ -0.34
Cdkn2bP55271 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.93□□□□□ -0.34
Cdkn2bP55271 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.93□□□□□ -0.34
Cdkn2bP55271 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdkn2bP55271 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Cdkn2bP55271 Gm25144-201ENSMUST00000179561 110 ntBASIC12.93□□□□□ -0.34
Cdkn2bP55271 Gm25352-201ENSMUST00000179815 110 ntBASIC12.93□□□□□ -0.34
Cdkn2bP55271 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.93□□□□□ -0.34
Cdkn2bP55271 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.93□□□□□ -0.34
Cdkn2bP55271 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdkn2bP55271 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdkn2bP55271 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Cdkn2bP55271 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdkn2bP55271 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdkn2bP55271 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cdkn2bP55271 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cdkn2bP55271 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdkn2bP55271 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms