Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NrlP54846 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NrlP54846 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.38□□□□□ -0.11
NrlP54846 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NrlP54846 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NrlP54846 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NrlP54846 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NrlP54846 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NrlP54846 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
NrlP54846 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
NrlP54846 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NrlP54846 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NrlP54846 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NrlP54846 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
NrlP54846 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NrlP54846 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NrlP54846 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NrlP54846 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NrlP54846 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NrlP54846 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NrlP54846 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
NrlP54846 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NrlP54846 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.37□□□□□ -0.11
NrlP54846 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NrlP54846 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NrlP54846 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NrlP54846 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.37□□□□□ -0.11
NrlP54846 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NrlP54846 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NrlP54846 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NrlP54846 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NrlP54846 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NrlP54846 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
NrlP54846 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NrlP54846 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NrlP54846 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NrlP54846 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NrlP54846 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.37□□□□□ -0.11
NrlP54846 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NrlP54846 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.37□□□□□ -0.11
NrlP54846 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NrlP54846 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NrlP54846 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NrlP54846 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NrlP54846 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NrlP54846 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
NrlP54846 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NrlP54846 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NrlP54846 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NrlP54846 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.36□□□□□ -0.11
NrlP54846 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NrlP54846 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NrlP54846 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NrlP54846 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NrlP54846 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NrlP54846 Gm19184-201ENSMUST00000196798 928 ntBASIC14.36□□□□□ -0.11
NrlP54846 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NrlP54846 Gm45880-201ENSMUST00000213041 853 ntBASIC14.36□□□□□ -0.11
NrlP54846 Gm19309-201ENSMUST00000218295 205 ntBASIC14.36□□□□□ -0.11
NrlP54846 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NrlP54846 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NrlP54846 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
NrlP54846 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NrlP54846 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NrlP54846 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.36□□□□□ -0.11
NrlP54846 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NrlP54846 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NrlP54846 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NrlP54846 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NrlP54846 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NrlP54846 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NrlP54846 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NrlP54846 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.36□□□□□ -0.11
NrlP54846 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
NrlP54846 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NrlP54846 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NrlP54846 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NrlP54846 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NrlP54846 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NrlP54846 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NrlP54846 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NrlP54846 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.35□□□□□ -0.11
NrlP54846 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NrlP54846 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NrlP54846 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NrlP54846 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NrlP54846 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
NrlP54846 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.35□□□□□ -0.11
NrlP54846 Gm7172-201ENSMUST00000218047 1152 ntBASIC14.35□□□□□ -0.11
NrlP54846 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.35□□□□□ -0.11
NrlP54846 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NrlP54846 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NrlP54846 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NrlP54846 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NrlP54846 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NrlP54846 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.35□□□□□ -0.11
NrlP54846 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NrlP54846 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NrlP54846 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NrlP54846 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms