Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atxn1P54254 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.41□□□□□ -0.26
Atxn1P54254 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Atxn1P54254 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atxn1P54254 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atxn1P54254 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atxn1P54254 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atxn1P54254 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Atxn1P54254 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atxn1P54254 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atxn1P54254 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.41□□□□□ -0.26
Atxn1P54254 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atxn1P54254 Gm12241-201ENSMUST00000118330 726 ntBASIC13.41□□□□□ -0.26
Atxn1P54254 Gm15957-201ENSMUST00000118893 974 ntBASIC13.41□□□□□ -0.26
Atxn1P54254 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC13.41□□□□□ -0.26
Atxn1P54254 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atxn1P54254 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Atxn1P54254 Olfr284-202ENSMUST00000206647 966 ntBASIC13.41□□□□□ -0.26
Atxn1P54254 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC13.41□□□□□ -0.26
Atxn1P54254 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Atxn1P54254 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Atxn1P54254 Gm8598-201ENSMUST00000221184 836 ntBASIC13.41□□□□□ -0.26
Atxn1P54254 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.41□□□□□ -0.26
Atxn1P54254 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atxn1P54254 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atxn1P54254 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atxn1P54254 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Atxn1P54254 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Atxn1P54254 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Atxn1P54254 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atxn1P54254 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atxn1P54254 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Atxn1P54254 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atxn1P54254 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atxn1P54254 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atxn1P54254 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Atxn1P54254 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atxn1P54254 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atxn1P54254 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atxn1P54254 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atxn1P54254 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Atxn1P54254 Matn2-206ENSMUST00000228570 2798 ntBASIC13.4□□□□□ -0.26
Atxn1P54254 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atxn1P54254 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Atxn1P54254 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atxn1P54254 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atxn1P54254 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Atxn1P54254 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atxn1P54254 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Atxn1P54254 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.4□□□□□ -0.26
Atxn1P54254 Gm15782-201ENSMUST00000121073 445 ntBASIC13.4□□□□□ -0.26
Atxn1P54254 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC13.4□□□□□ -0.26
Atxn1P54254 Gm27682-201ENSMUST00000183930 110 ntBASIC13.4□□□□□ -0.26
Atxn1P54254 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Atxn1P54254 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Atxn1P54254 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.4□□□□□ -0.26
Atxn1P54254 Gm43133-201ENSMUST00000197472 463 ntBASIC13.4□□□□□ -0.26
Atxn1P54254 Rps4l-202ENSMUST00000204242 789 ntBASIC13.4□□□□□ -0.26
Atxn1P54254 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Atxn1P54254 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.4□□□□□ -0.26
Atxn1P54254 Gm18473-201ENSMUST00000220543 868 ntBASIC13.4□□□□□ -0.26
Atxn1P54254 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.4□□□□□ -0.26
Atxn1P54254 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atxn1P54254 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atxn1P54254 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Atxn1P54254 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atxn1P54254 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Atxn1P54254 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Atxn1P54254 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atxn1P54254 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Atxn1P54254 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atxn1P54254 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atxn1P54254 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atxn1P54254 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atxn1P54254 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atxn1P54254 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Atxn1P54254 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Atxn1P54254 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Atxn1P54254 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Atxn1P54254 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.4□□□□□ -0.27
Atxn1P54254 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Atxn1P54254 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atxn1P54254 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atxn1P54254 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atxn1P54254 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.39□□□□□ -0.27
Atxn1P54254 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atxn1P54254 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atxn1P54254 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Atxn1P54254 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Atxn1P54254 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Atxn1P54254 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Atxn1P54254 Gm13461-201ENSMUST00000120980 662 ntBASIC13.39□□□□□ -0.27
Atxn1P54254 Gm12882-201ENSMUST00000121696 517 ntBASIC13.39□□□□□ -0.27
Atxn1P54254 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.39□□□□□ -0.27
Atxn1P54254 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.39□□□□□ -0.27
Atxn1P54254 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Atxn1P54254 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Atxn1P54254 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Atxn1P54254 AC113441.2-201ENSMUST00000221538 1468 ntBASIC13.39□□□□□ -0.27
Atxn1P54254 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms