Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Fdft1P53798 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Fdft1P53798 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.53□□□□□ -0.24
Fdft1P53798 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Fdft1P53798 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Fdft1P53798 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Fdft1P53798 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Fdft1P53798 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Fdft1P53798 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Fdft1P53798 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Fdft1P53798 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Fdft1P53798 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Fdft1P53798 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Fdft1P53798 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Fdft1P53798 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Fdft1P53798 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Fdft1P53798 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Fdft1P53798 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Fdft1P53798 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Fdft1P53798 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Fdft1P53798 Gm4875-201ENSMUST00000118257 786 ntBASIC13.52□□□□□ -0.25
Fdft1P53798 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.52□□□□□ -0.25
Fdft1P53798 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.52□□□□□ -0.25
Fdft1P53798 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Fdft1P53798 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Fdft1P53798 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.52□□□□□ -0.25
Fdft1P53798 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.52□□□□□ -0.25
Fdft1P53798 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Fdft1P53798 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Fdft1P53798 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Fdft1P53798 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Fdft1P53798 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Fdft1P53798 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Fdft1P53798 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Fdft1P53798 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Fdft1P53798 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.52□□□□□ -0.25
Fdft1P53798 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Fdft1P53798 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.52□□□□□ -0.25
Fdft1P53798 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.52□□□□□ -0.25
Fdft1P53798 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.52□□□□□ -0.25
Fdft1P53798 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Fdft1P53798 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Fdft1P53798 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Fdft1P53798 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Fdft1P53798 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.52□□□□□ -0.25
Fdft1P53798 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Fdft1P53798 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Fdft1P53798 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Fdft1P53798 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Fdft1P53798 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Fdft1P53798 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Fdft1P53798 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Fdft1P53798 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Fdft1P53798 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Fdft1P53798 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Fdft1P53798 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Fdft1P53798 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Fdft1P53798 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Fdft1P53798 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.51□□□□□ -0.25
Fdft1P53798 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Fdft1P53798 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Fdft1P53798 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Fdft1P53798 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Fdft1P53798 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Fdft1P53798 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Fdft1P53798 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Fdft1P53798 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Fdft1P53798 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Fdft1P53798 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.51□□□□□ -0.25
Fdft1P53798 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.51□□□□□ -0.25
Fdft1P53798 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.51□□□□□ -0.25
Fdft1P53798 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.51□□□□□ -0.25
Fdft1P53798 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.51□□□□□ -0.25
Fdft1P53798 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Fdft1P53798 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Fdft1P53798 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Fdft1P53798 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Fdft1P53798 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.51□□□□□ -0.25
Fdft1P53798 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Fdft1P53798 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Fdft1P53798 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Fdft1P53798 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Fdft1P53798 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Fdft1P53798 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Fdft1P53798 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Fdft1P53798 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Fdft1P53798 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Fdft1P53798 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Fdft1P53798 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Fdft1P53798 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Fdft1P53798 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Fdft1P53798 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Fdft1P53798 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Fdft1P53798 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Fdft1P53798 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Fdft1P53798 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Fdft1P53798 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.5□□□□□ -0.25
Fdft1P53798 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Fdft1P53798 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Fdft1P53798 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms