Protein–RNA interactions for Protein: P50586

Tub, Tubby protein, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TubP50586 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.86□□□□□ -0.19
TubP50586 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
TubP50586 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TubP50586 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TubP50586 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TubP50586 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
TubP50586 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TubP50586 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TubP50586 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TubP50586 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TubP50586 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TubP50586 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TubP50586 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TubP50586 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TubP50586 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TubP50586 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TubP50586 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TubP50586 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TubP50586 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TubP50586 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TubP50586 Gm12490-201ENSMUST00000120255 560 ntBASIC13.85□□□□□ -0.19
TubP50586 Gm11918-201ENSMUST00000121660 179 ntBASIC13.85□□□□□ -0.19
TubP50586 Gm28911-201ENSMUST00000188837 117 ntBASIC13.85□□□□□ -0.19
TubP50586 Gm38144-201ENSMUST00000192790 465 ntBASIC13.85□□□□□ -0.19
TubP50586 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.85□□□□□ -0.19
TubP50586 Gm45384-201ENSMUST00000210451 277 ntBASIC13.85□□□□□ -0.19
TubP50586 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.85□□□□□ -0.19
TubP50586 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
TubP50586 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TubP50586 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TubP50586 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TubP50586 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TubP50586 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TubP50586 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TubP50586 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TubP50586 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.85□□□□□ -0.19
TubP50586 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TubP50586 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.85□□□□□ -0.19
TubP50586 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TubP50586 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
TubP50586 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.85□□□□□ -0.19
TubP50586 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TubP50586 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TubP50586 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TubP50586 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TubP50586 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TubP50586 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TubP50586 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TubP50586 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TubP50586 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TubP50586 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TubP50586 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.84□□□□□ -0.19
TubP50586 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TubP50586 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TubP50586 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.84□□□□□ -0.19
TubP50586 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TubP50586 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TubP50586 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TubP50586 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TubP50586 Gm15371-201ENSMUST00000117057 784 ntBASIC13.84□□□□□ -0.19
TubP50586 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.84□□□□□ -0.19
TubP50586 Gm12138-201ENSMUST00000122180 951 ntBASIC13.84□□□□□ -0.19
TubP50586 Gm15429-201ENSMUST00000151268 798 ntBASIC13.84□□□□□ -0.19
TubP50586 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.84□□□□□ -0.19
TubP50586 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.84□□□□□ -0.19
TubP50586 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TubP50586 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TubP50586 Gm27701-201ENSMUST00000184498 110 ntBASIC13.84□□□□□ -0.19
TubP50586 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TubP50586 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TubP50586 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TubP50586 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TubP50586 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TubP50586 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TubP50586 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.84□□□□□ -0.19
TubP50586 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TubP50586 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TubP50586 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
TubP50586 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
TubP50586 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TubP50586 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TubP50586 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TubP50586 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TubP50586 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
TubP50586 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TubP50586 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TubP50586 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
TubP50586 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TubP50586 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TubP50586 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
TubP50586 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.19
TubP50586 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
TubP50586 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TubP50586 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.83□□□□□ -0.2
TubP50586 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
TubP50586 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.83□□□□□ -0.2
TubP50586 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TubP50586 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TubP50586 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TubP50586 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms