Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-1P50220 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.19□□□□□ -0.62
Nkx2-1P50220 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Nkx2-1P50220 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Nkx2-1P50220 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-1P50220 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.19□□□□□ -0.62
Nkx2-1P50220 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-1P50220 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx2-1P50220 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.19□□□□□ -0.62
Nkx2-1P50220 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Nkx2-1P50220 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-1P50220 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-1P50220 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-1P50220 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Nkx2-1P50220 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Nkx2-1P50220 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-1P50220 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-1P50220 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-1P50220 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-1P50220 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Nkx2-1P50220 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-1P50220 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC11.18□□□□□ -0.62
Nkx2-1P50220 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-1P50220 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-1P50220 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Nkx2-1P50220 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Nkx2-1P50220 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Nkx2-1P50220 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC11.18□□□□□ -0.62
Nkx2-1P50220 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC11.18□□□□□ -0.62
Nkx2-1P50220 Gm18737-201ENSMUST00000173594 937 ntBASIC11.18□□□□□ -0.62
Nkx2-1P50220 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC11.18□□□□□ -0.62
Nkx2-1P50220 Gm18027-201ENSMUST00000218947 619 ntBASIC11.18□□□□□ -0.62
Nkx2-1P50220 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC11.18□□□□□ -0.62
Nkx2-1P50220 CT030684.1-201ENSMUST00000227292 914 ntBASIC11.18□□□□□ -0.62
Nkx2-1P50220 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-1P50220 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-1P50220 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Nkx2-1P50220 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Nkx2-1P50220 Syt7-205ENSMUST00000224135 1557 ntBASIC11.18□□□□□ -0.62
Nkx2-1P50220 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-1P50220 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-1P50220 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.18□□□□□ -0.62
Nkx2-1P50220 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-1P50220 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-1P50220 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Nkx2-1P50220 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-1P50220 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-1P50220 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.18□□□□□ -0.62
Nkx2-1P50220 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx2-1P50220 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.17□□□□□ -0.62
Nkx2-1P50220 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.17□□□□□ -0.62
Nkx2-1P50220 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-1P50220 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-1P50220 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-1P50220 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-1P50220 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Nkx2-1P50220 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-1P50220 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-1P50220 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-1P50220 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-1P50220 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-1P50220 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-1P50220 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-1P50220 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-1P50220 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-1P50220 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-1P50220 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-1P50220 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-1P50220 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC11.17□□□□□ -0.62
Nkx2-1P50220 Gm6973-201ENSMUST00000117080 721 ntBASIC11.17□□□□□ -0.62
Nkx2-1P50220 Gm6226-201ENSMUST00000117765 1146 ntBASIC11.17□□□□□ -0.62
Nkx2-1P50220 Gm14494-201ENSMUST00000118786 435 ntBASIC11.17□□□□□ -0.62
Nkx2-1P50220 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC11.17□□□□□ -0.62
Nkx2-1P50220 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC11.17□□□□□ -0.62
Nkx2-1P50220 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-1P50220 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.17□□□□□ -0.62
Nkx2-1P50220 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC11.17□□□□□ -0.62
Nkx2-1P50220 Gm5264-201ENSMUST00000190584 848 ntBASIC11.17□□□□□ -0.62
Nkx2-1P50220 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC11.17□□□□□ -0.62
Nkx2-1P50220 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC11.17□□□□□ -0.62
Nkx2-1P50220 Bloc1s5-203ENSMUST00000224902 612 ntBASIC11.17□□□□□ -0.62
Nkx2-1P50220 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-1P50220 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-1P50220 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Nkx2-1P50220 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Nkx2-1P50220 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-1P50220 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-1P50220 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-1P50220 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.17□□□□□ -0.62
Nkx2-1P50220 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-1P50220 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-1P50220 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Nkx2-1P50220 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-1P50220 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-1P50220 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Nkx2-1P50220 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-1P50220 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx2-1P50220 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.17□□□□□ -0.62
Nkx2-1P50220 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nkx2-1P50220 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms