Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Brca1P48754 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Brca1P48754 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.87□□□□□ -0.03
Brca1P48754 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brca1P48754 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Brca1P48754 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brca1P48754 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Brca1P48754 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brca1P48754 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brca1P48754 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Brca1P48754 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.87□□□□□ -0.03
Brca1P48754 Daam2-202ENSMUST00000224595 1926 ntBASIC14.87□□□□□ -0.03
Brca1P48754 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Brca1P48754 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Brca1P48754 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Brca1P48754 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Brca1P48754 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.87□□□□□ -0.03
Brca1P48754 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Brca1P48754 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC14.87□□□□□ -0.03
Brca1P48754 Gm9555-201ENSMUST00000200908 583 ntBASIC14.87□□□□□ -0.03
Brca1P48754 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.87□□□□□ -0.03
Brca1P48754 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brca1P48754 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brca1P48754 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brca1P48754 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Brca1P48754 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Brca1P48754 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.87□□□□□ -0.03
Brca1P48754 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brca1P48754 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Brca1P48754 Crry-ps-201ENSMUST00000079090 1309 ntBASIC14.86□□□□□ -0.03
Brca1P48754 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Brca1P48754 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brca1P48754 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brca1P48754 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brca1P48754 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brca1P48754 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brca1P48754 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brca1P48754 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brca1P48754 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Brca1P48754 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Brca1P48754 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Brca1P48754 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brca1P48754 Gm23363-201ENSMUST00000175024 79 ntBASIC14.86□□□□□ -0.03
Brca1P48754 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brca1P48754 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brca1P48754 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brca1P48754 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Brca1P48754 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brca1P48754 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Brca1P48754 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brca1P48754 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brca1P48754 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brca1P48754 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brca1P48754 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Brca1P48754 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Brca1P48754 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brca1P48754 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brca1P48754 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.86□□□□□ -0.03
Brca1P48754 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Brca1P48754 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brca1P48754 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brca1P48754 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brca1P48754 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.85□□□□□ -0.03
Brca1P48754 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brca1P48754 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brca1P48754 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC14.85□□□□□ -0.03
Brca1P48754 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brca1P48754 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.85□□□□□ -0.03
Brca1P48754 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brca1P48754 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Brca1P48754 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brca1P48754 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brca1P48754 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Brca1P48754 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brca1P48754 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Brca1P48754 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brca1P48754 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brca1P48754 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Brca1P48754 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brca1P48754 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Brca1P48754 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brca1P48754 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Brca1P48754 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brca1P48754 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Brca1P48754 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brca1P48754 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brca1P48754 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brca1P48754 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Brca1P48754 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.85□□□□□ -0.03
Brca1P48754 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brca1P48754 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brca1P48754 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brca1P48754 Gm13736-201ENSMUST00000119272 253 ntBASIC14.85□□□□□ -0.03
Brca1P48754 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brca1P48754 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Brca1P48754 Mir7221-201ENSMUST00000184009 72 ntBASIC14.85□□□□□ -0.03
Brca1P48754 Gm38092-201ENSMUST00000195600 653 ntBASIC14.85□□□□□ -0.03
Brca1P48754 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.85□□□□□ -0.03
Brca1P48754 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brca1P48754 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms