Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox18P43680 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox18P43680 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox18P43680 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13□□□□□ -0.33
Sox18P43680 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox18P43680 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC13□□□□□ -0.33
Sox18P43680 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox18P43680 Gm43435-201ENSMUST00000199996 1438 ntBASIC13□□□□□ -0.33
Sox18P43680 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13□□□□□ -0.33
Sox18P43680 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13□□□□□ -0.33
Sox18P43680 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox18P43680 Mir686-201ENSMUST00000102174 109 ntBASIC13□□□□□ -0.33
Sox18P43680 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13□□□□□ -0.33
Sox18P43680 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox18P43680 Gm5687-201ENSMUST00000118252 640 ntBASIC13□□□□□ -0.33
Sox18P43680 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox18P43680 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13□□□□□ -0.33
Sox18P43680 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13□□□□□ -0.33
Sox18P43680 Gm18595-201ENSMUST00000175736 1068 ntBASIC13□□□□□ -0.33
Sox18P43680 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox18P43680 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox18P43680 Gm6621-201ENSMUST00000193251 772 ntBASIC13□□□□□ -0.33
Sox18P43680 Gm10608-202ENSMUST00000213924 676 ntBASIC13□□□□□ -0.33
Sox18P43680 Gm8227-201ENSMUST00000223306 571 ntBASIC13□□□□□ -0.33
Sox18P43680 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sox18P43680 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sox18P43680 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Sox18P43680 Gm43697-201ENSMUST00000199637 2581 ntBASIC13□□□□□ -0.33
Sox18P43680 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox18P43680 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox18P43680 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox18P43680 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox18P43680 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox18P43680 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Sox18P43680 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.99□□□□□ -0.33
Sox18P43680 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox18P43680 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.99□□□□□ -0.33
Sox18P43680 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox18P43680 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.99□□□□□ -0.33
Sox18P43680 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Sox18P43680 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.99□□□□□ -0.33
Sox18P43680 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC12.99□□□□□ -0.33
Sox18P43680 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
Sox18P43680 Csnk1a1-208ENSMUST00000167187 1222 ntTSL 5 BASIC12.99□□□□□ -0.33
Sox18P43680 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox18P43680 Gm43452-201ENSMUST00000201873 991 ntBASIC12.99□□□□□ -0.33
Sox18P43680 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.99□□□□□ -0.33
Sox18P43680 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.99□□□□□ -0.33
Sox18P43680 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox18P43680 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox18P43680 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox18P43680 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Sox18P43680 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox18P43680 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox18P43680 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox18P43680 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox18P43680 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox18P43680 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox18P43680 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox18P43680 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox18P43680 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox18P43680 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox18P43680 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox18P43680 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox18P43680 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sox18P43680 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.98□□□□□ -0.33
Sox18P43680 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox18P43680 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox18P43680 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox18P43680 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox18P43680 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox18P43680 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox18P43680 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox18P43680 Gm14263-201ENSMUST00000117955 746 ntBASIC12.98□□□□□ -0.33
Sox18P43680 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.98□□□□□ -0.33
Sox18P43680 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.98□□□□□ -0.33
Sox18P43680 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox18P43680 Gm28925-201ENSMUST00000188586 168 ntBASIC12.98□□□□□ -0.33
Sox18P43680 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.98□□□□□ -0.33
Sox18P43680 Gm38158-201ENSMUST00000194617 339 ntBASIC12.98□□□□□ -0.33
Sox18P43680 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Sox18P43680 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox18P43680 Gm5161-201ENSMUST00000075243 853 ntBASIC12.98□□□□□ -0.33
Sox18P43680 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox18P43680 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Sox18P43680 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox18P43680 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sox18P43680 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.98□□□□□ -0.33
Sox18P43680 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox18P43680 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sox18P43680 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox18P43680 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox18P43680 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox18P43680 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Sox18P43680 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox18P43680 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox18P43680 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox18P43680 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Sox18P43680 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox18P43680 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms