Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Upk2P38575 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk2P38575 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC11.86□□□□□ -0.51
Upk2P38575 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk2P38575 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk2P38575 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk2P38575 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Upk2P38575 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Upk2P38575 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Upk2P38575 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk2P38575 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Upk2P38575 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Upk2P38575 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk2P38575 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk2P38575 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.85□□□□□ -0.51
Upk2P38575 Gm11524-201ENSMUST00000119349 807 ntBASIC11.85□□□□□ -0.51
Upk2P38575 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.85□□□□□ -0.51
Upk2P38575 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.85□□□□□ -0.51
Upk2P38575 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.85□□□□□ -0.51
Upk2P38575 Gm12403-201ENSMUST00000121384 959 ntBASIC11.85□□□□□ -0.51
Upk2P38575 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.85□□□□□ -0.51
Upk2P38575 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Upk2P38575 Gm26464-201ENSMUST00000157094 305 ntBASIC11.85□□□□□ -0.51
Upk2P38575 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Upk2P38575 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.85□□□□□ -0.51
Upk2P38575 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.85□□□□□ -0.51
Upk2P38575 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.85□□□□□ -0.51
Upk2P38575 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.85□□□□□ -0.51
Upk2P38575 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.85□□□□□ -0.51
Upk2P38575 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk2P38575 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk2P38575 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk2P38575 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.85□□□□□ -0.51
Upk2P38575 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.85□□□□□ -0.51
Upk2P38575 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk2P38575 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk2P38575 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk2P38575 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.85□□□□□ -0.51
Upk2P38575 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk2P38575 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Upk2P38575 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Upk2P38575 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk2P38575 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.85□□□□□ -0.51
Upk2P38575 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.85□□□□□ -0.51
Upk2P38575 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk2P38575 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk2P38575 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk2P38575 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.85□□□□□ -0.51
Upk2P38575 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Upk2P38575 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk2P38575 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk2P38575 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.84□□□□□ -0.51
Upk2P38575 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.84□□□□□ -0.51
Upk2P38575 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.84□□□□□ -0.51
Upk2P38575 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk2P38575 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk2P38575 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk2P38575 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.84□□□□□ -0.51
Upk2P38575 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk2P38575 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk2P38575 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.84□□□□□ -0.51
Upk2P38575 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.84□□□□□ -0.51
Upk2P38575 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk2P38575 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk2P38575 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk2P38575 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Upk2P38575 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Upk2P38575 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk2P38575 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Upk2P38575 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk2P38575 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk2P38575 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.84□□□□□ -0.51
Upk2P38575 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Upk2P38575 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk2P38575 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Upk2P38575 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk2P38575 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk2P38575 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Upk2P38575 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Upk2P38575 Gm5354-201ENSMUST00000182417 973 ntBASIC11.84□□□□□ -0.51
Upk2P38575 Gm38144-201ENSMUST00000192790 465 ntBASIC11.84□□□□□ -0.51
Upk2P38575 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.84□□□□□ -0.51
Upk2P38575 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Upk2P38575 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.84□□□□□ -0.51
Upk2P38575 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.84□□□□□ -0.51
Upk2P38575 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.84□□□□□ -0.51
Upk2P38575 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Upk2P38575 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Upk2P38575 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Upk2P38575 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Upk2P38575 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk2P38575 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk2P38575 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.84□□□□□ -0.51
Upk2P38575 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk2P38575 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk2P38575 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk2P38575 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk2P38575 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.84□□□□□ -0.51
Upk2P38575 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk2P38575 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms