Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.23□□□□□ -0.13
Rfc1P35601 Gm15467-201ENSMUST00000120582 445 ntBASIC14.23□□□□□ -0.13
Rfc1P35601 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc1P35601 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.23□□□□□ -0.13
Rfc1P35601 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.23□□□□□ -0.13
Rfc1P35601 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.23□□□□□ -0.13
Rfc1P35601 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Rfc1P35601 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.23□□□□□ -0.13
Rfc1P35601 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc1P35601 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Rfc1P35601 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc1P35601 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc1P35601 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc1P35601 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rfc1P35601 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc1P35601 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc1P35601 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc1P35601 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Rfc1P35601 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfc1P35601 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc1P35601 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc1P35601 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc1P35601 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc1P35601 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc1P35601 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc1P35601 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc1P35601 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Rfc1P35601 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc1P35601 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc1P35601 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc1P35601 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc1P35601 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc1P35601 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc1P35601 Gm14494-201ENSMUST00000118786 435 ntBASIC14.22□□□□□ -0.13
Rfc1P35601 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc1P35601 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc1P35601 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.22□□□□□ -0.13
Rfc1P35601 Gm27525-201ENSMUST00000184465 107 ntBASIC14.22□□□□□ -0.13
Rfc1P35601 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.22□□□□□ -0.13
Rfc1P35601 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.22□□□□□ -0.13
Rfc1P35601 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc1P35601 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc1P35601 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc1P35601 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rfc1P35601 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc1P35601 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC14.22□□□□□ -0.13
Rfc1P35601 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc1P35601 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc1P35601 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc1P35601 Gm43051-201ENSMUST00000201096 2678 ntBASIC14.22□□□□□ -0.13
Rfc1P35601 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Rfc1P35601 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc1P35601 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc1P35601 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc1P35601 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Rfc1P35601 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc1P35601 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfc1P35601 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc1P35601 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rfc1P35601 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc1P35601 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc1P35601 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc1P35601 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc1P35601 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc1P35601 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc1P35601 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc1P35601 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc1P35601 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc1P35601 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc1P35601 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc1P35601 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.21□□□□□ -0.13
Rfc1P35601 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc1P35601 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.21□□□□□ -0.13
Rfc1P35601 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.21□□□□□ -0.13
Rfc1P35601 Gm20553-201ENSMUST00000204205 844 ntBASIC14.21□□□□□ -0.13
Rfc1P35601 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.21□□□□□ -0.13
Rfc1P35601 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc1P35601 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc1P35601 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rfc1P35601 Gm10175-201ENSMUST00000086013 645 ntBASIC14.21□□□□□ -0.13
Rfc1P35601 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc1P35601 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc1P35601 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc1P35601 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc1P35601 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfc1P35601 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rfc1P35601 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rfc1P35601 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Rfc1P35601 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rfc1P35601 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Rfc1P35601 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Rfc1P35601 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rfc1P35601 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.2□□□□□ -0.14
Rfc1P35601 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc1P35601 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc1P35601 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc1P35601 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rfc1P35601 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.2□□□□□ -0.14
Rfc1P35601 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rfc1P35601 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms