Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.5□□□□□ -0.41
Foxa1P35582 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.5□□□□□ -0.41
Foxa1P35582 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.5□□□□□ -0.41
Foxa1P35582 Gm12403-201ENSMUST00000121384 959 ntBASIC12.5□□□□□ -0.41
Foxa1P35582 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.5□□□□□ -0.41
Foxa1P35582 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.5□□□□□ -0.41
Foxa1P35582 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Foxa1P35582 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Foxa1P35582 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.5□□□□□ -0.41
Foxa1P35582 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.5□□□□□ -0.41
Foxa1P35582 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.5□□□□□ -0.41
Foxa1P35582 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.5□□□□□ -0.41
Foxa1P35582 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.5□□□□□ -0.41
Foxa1P35582 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Foxa1P35582 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.5□□□□□ -0.41
Foxa1P35582 Gm45668-201ENSMUST00000211271 493 ntBASIC12.5□□□□□ -0.41
Foxa1P35582 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxa1P35582 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxa1P35582 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.5□□□□□ -0.41
Foxa1P35582 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxa1P35582 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxa1P35582 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxa1P35582 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Foxa1P35582 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxa1P35582 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxa1P35582 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxa1P35582 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Foxa1P35582 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxa1P35582 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Foxa1P35582 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxa1P35582 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxa1P35582 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.5□□□□□ -0.41
Foxa1P35582 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxa1P35582 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Foxa1P35582 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Foxa1P35582 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Foxa1P35582 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Foxa1P35582 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Foxa1P35582 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxa1P35582 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxa1P35582 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxa1P35582 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Foxa1P35582 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxa1P35582 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Foxa1P35582 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxa1P35582 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.49□□□□□ -0.41
Foxa1P35582 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Foxa1P35582 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxa1P35582 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Foxa1P35582 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Foxa1P35582 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxa1P35582 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Foxa1P35582 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.49□□□□□ -0.41
Foxa1P35582 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxa1P35582 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxa1P35582 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.49□□□□□ -0.41
Foxa1P35582 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxa1P35582 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.49□□□□□ -0.41
Foxa1P35582 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.49□□□□□ -0.41
Foxa1P35582 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Foxa1P35582 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Foxa1P35582 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Foxa1P35582 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Foxa1P35582 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxa1P35582 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Foxa1P35582 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Foxa1P35582 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.49□□□□□ -0.41
Foxa1P35582 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Foxa1P35582 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Foxa1P35582 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Foxa1P35582 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Foxa1P35582 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Foxa1P35582 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Foxa1P35582 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Foxa1P35582 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.48□□□□□ -0.41
Foxa1P35582 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Foxa1P35582 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.48□□□□□ -0.41
Foxa1P35582 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Foxa1P35582 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Foxa1P35582 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Foxa1P35582 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Foxa1P35582 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Foxa1P35582 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Foxa1P35582 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Foxa1P35582 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Foxa1P35582 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Foxa1P35582 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Foxa1P35582 Gm13689-201ENSMUST00000119360 685 ntBASIC12.48□□□□□ -0.41
Foxa1P35582 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Foxa1P35582 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.48□□□□□ -0.41
Foxa1P35582 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Foxa1P35582 Mir7654-201ENSMUST00000185082 70 ntBASIC12.48□□□□□ -0.41
Foxa1P35582 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Foxa1P35582 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Foxa1P35582 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Foxa1P35582 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Foxa1P35582 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Foxa1P35582 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Foxa1P35582 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Foxa1P35582 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms