Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a13P31649 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a13P31649 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.7□□□□□ -0.22
Slc6a13P31649 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Slc6a13P31649 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.7□□□□□ -0.22
Slc6a13P31649 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a13P31649 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a13P31649 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Slc6a13P31649 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.7□□□□□ -0.22
Slc6a13P31649 Gm23984-201ENSMUST00000157139 203 ntBASIC13.7□□□□□ -0.22
Slc6a13P31649 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Slc6a13P31649 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a13P31649 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.7□□□□□ -0.22
Slc6a13P31649 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a13P31649 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.7□□□□□ -0.22
Slc6a13P31649 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a13P31649 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a13P31649 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a13P31649 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.7□□□□□ -0.22
Slc6a13P31649 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a13P31649 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a13P31649 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a13P31649 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Slc6a13P31649 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.69□□□□□ -0.22
Slc6a13P31649 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a13P31649 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a13P31649 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a13P31649 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a13P31649 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Slc6a13P31649 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a13P31649 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a13P31649 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.69□□□□□ -0.22
Slc6a13P31649 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Slc6a13P31649 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.69□□□□□ -0.22
Slc6a13P31649 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a13P31649 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a13P31649 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.69□□□□□ -0.22
Slc6a13P31649 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a13P31649 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a13P31649 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a13P31649 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a13P31649 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Slc6a13P31649 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a13P31649 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a13P31649 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a13P31649 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a13P31649 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.69□□□□□ -0.22
Slc6a13P31649 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Slc6a13P31649 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a13P31649 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Slc6a13P31649 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a13P31649 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.69□□□□□ -0.22
Slc6a13P31649 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a13P31649 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a13P31649 Gm6180-201ENSMUST00000065243 498 ntBASIC13.69□□□□□ -0.22
Slc6a13P31649 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a13P31649 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a13P31649 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a13P31649 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a13P31649 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a13P31649 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a13P31649 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a13P31649 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a13P31649 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Slc6a13P31649 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a13P31649 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a13P31649 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a13P31649 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a13P31649 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a13P31649 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Slc6a13P31649 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a13P31649 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Slc6a13P31649 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a13P31649 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
Slc6a13P31649 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a13P31649 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a13P31649 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a13P31649 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a13P31649 Gm42550-201ENSMUST00000201553 960 ntBASIC13.68□□□□□ -0.22
Slc6a13P31649 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.68□□□□□ -0.22
Slc6a13P31649 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a13P31649 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.68□□□□□ -0.22
Slc6a13P31649 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.68□□□□□ -0.22
Slc6a13P31649 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.68□□□□□ -0.22
Slc6a13P31649 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Slc6a13P31649 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a13P31649 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.68□□□□□ -0.22
Slc6a13P31649 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.68□□□□□ -0.22
Slc6a13P31649 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.68□□□□□ -0.22
Slc6a13P31649 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a13P31649 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a13P31649 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a13P31649 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Slc6a13P31649 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.68□□□□□ -0.22
Slc6a13P31649 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a13P31649 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a13P31649 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a13P31649 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a13P31649 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a13P31649 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms