Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.12■□□□□ 0.01
Col2a1P28481 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col2a1P28481 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col2a1P28481 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Col2a1P28481 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Col2a1P28481 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC15.12■□□□□ 0.01
Col2a1P28481 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col2a1P28481 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col2a1P28481 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col2a1P28481 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
Col2a1P28481 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col2a1P28481 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col2a1P28481 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col2a1P28481 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col2a1P28481 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col2a1P28481 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col2a1P28481 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col2a1P28481 Mir874-201ENSMUST00000104769 76 ntBASIC15.12■□□□□ 0.01
Col2a1P28481 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col2a1P28481 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC15.12■□□□□ 0.01
Col2a1P28481 Gm8738-201ENSMUST00000172606 329 ntBASIC15.12■□□□□ 0.01
Col2a1P28481 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col2a1P28481 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC15.12■□□□□ 0.01
Col2a1P28481 Gm44364-201ENSMUST00000198368 141 ntBASIC15.12■□□□□ 0.01
Col2a1P28481 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Col2a1P28481 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col2a1P28481 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col2a1P28481 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col2a1P28481 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col2a1P28481 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col2a1P28481 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col2a1P28481 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col2a1P28481 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col2a1P28481 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Col2a1P28481 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col2a1P28481 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.12■□□□□ 0.01
Col2a1P28481 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col2a1P28481 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col2a1P28481 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Col2a1P28481 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Col2a1P28481 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Col2a1P28481 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col2a1P28481 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col2a1P28481 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col2a1P28481 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col2a1P28481 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col2a1P28481 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col2a1P28481 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Col2a1P28481 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col2a1P28481 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col2a1P28481 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col2a1P28481 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col2a1P28481 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col2a1P28481 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Col2a1P28481 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Col2a1P28481 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col2a1P28481 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC15.11■□□□□ 0.01
Col2a1P28481 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col2a1P28481 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC15.11■□□□□ 0.01
Col2a1P28481 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col2a1P28481 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col2a1P28481 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col2a1P28481 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Col2a1P28481 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC15.11■□□□□ 0.01
Col2a1P28481 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Col2a1P28481 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col2a1P28481 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Col2a1P28481 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Col2a1P28481 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col2a1P28481 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC15.11■□□□□ 0.01
Col2a1P28481 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col2a1P28481 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Col2a1P28481 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Col2a1P28481 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col2a1P28481 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.11■□□□□ 0.01
Col2a1P28481 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Col2a1P28481 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Col2a1P28481 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col2a1P28481 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Col2a1P28481 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col2a1P28481 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col2a1P28481 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col2a1P28481 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Col2a1P28481 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col2a1P28481 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Col2a1P28481 Gm15370-201ENSMUST00000117158 253 ntBASIC15.1■□□□□ 0.01
Col2a1P28481 Gm11222-201ENSMUST00000119005 738 ntBASIC15.1■□□□□ 0.01
Col2a1P28481 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC15.1■□□□□ 0.01
Col2a1P28481 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC15.1■□□□□ 0.01
Col2a1P28481 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col2a1P28481 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC15.1■□□□□ 0.01
Col2a1P28481 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col2a1P28481 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC15.1■□□□□ 0.01
Col2a1P28481 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col2a1P28481 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Col2a1P28481 CT009713.10-202ENSMUST00000225734 696 ntBASIC15.1■□□□□ 0.01
Col2a1P28481 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col2a1P28481 Gm38157-201ENSMUST00000194178 1698 ntBASIC15.1■□□□□ 0.01
Col2a1P28481 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Col2a1P28481 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms