Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.28□□□□□ -0.6
Col8a2P25318 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a2P25318 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a2P25318 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.28□□□□□ -0.6
Col8a2P25318 Gm9002-201ENSMUST00000178437 499 ntBASIC11.28□□□□□ -0.6
Col8a2P25318 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.28□□□□□ -0.6
Col8a2P25318 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.28□□□□□ -0.6
Col8a2P25318 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a2P25318 Gm7287-201ENSMUST00000205267 602 ntBASIC11.28□□□□□ -0.6
Col8a2P25318 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a2P25318 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.28□□□□□ -0.6
Col8a2P25318 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a2P25318 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a2P25318 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.28□□□□□ -0.6
Col8a2P25318 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a2P25318 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a2P25318 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a2P25318 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC11.28□□□□□ -0.6
Col8a2P25318 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a2P25318 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a2P25318 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a2P25318 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a2P25318 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Col8a2P25318 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.28□□□□□ -0.6
Col8a2P25318 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a2P25318 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Col8a2P25318 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
Col8a2P25318 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Col8a2P25318 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Col8a2P25318 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.27□□□□□ -0.6
Col8a2P25318 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Col8a2P25318 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Col8a2P25318 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Col8a2P25318 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Col8a2P25318 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Col8a2P25318 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Col8a2P25318 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Col8a2P25318 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.27□□□□□ -0.6
Col8a2P25318 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Col8a2P25318 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col8a2P25318 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col8a2P25318 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Col8a2P25318 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col8a2P25318 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Col8a2P25318 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col8a2P25318 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Col8a2P25318 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Col8a2P25318 Gm38223-201ENSMUST00000194484 695 ntBASIC11.27□□□□□ -0.61
Col8a2P25318 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.27□□□□□ -0.61
Col8a2P25318 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.27□□□□□ -0.61
Col8a2P25318 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col8a2P25318 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.27□□□□□ -0.61
Col8a2P25318 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col8a2P25318 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col8a2P25318 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col8a2P25318 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col8a2P25318 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Col8a2P25318 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col8a2P25318 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.27□□□□□ -0.61
Col8a2P25318 Gm6091-201ENSMUST00000098307 165 ntBASIC11.27□□□□□ -0.61
Col8a2P25318 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col8a2P25318 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Col8a2P25318 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC11.27□□□□□ -0.61
Col8a2P25318 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col8a2P25318 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Col8a2P25318 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col8a2P25318 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Col8a2P25318 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col8a2P25318 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col8a2P25318 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col8a2P25318 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col8a2P25318 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col8a2P25318 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col8a2P25318 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col8a2P25318 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col8a2P25318 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col8a2P25318 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Col8a2P25318 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col8a2P25318 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col8a2P25318 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col8a2P25318 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col8a2P25318 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col8a2P25318 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Col8a2P25318 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Col8a2P25318 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col8a2P25318 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col8a2P25318 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Col8a2P25318 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col8a2P25318 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Col8a2P25318 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.26□□□□□ -0.61
Col8a2P25318 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col8a2P25318 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col8a2P25318 Gm11803-201ENSMUST00000119966 444 ntBASIC11.26□□□□□ -0.61
Col8a2P25318 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col8a2P25318 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.26□□□□□ -0.61
Col8a2P25318 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.26□□□□□ -0.61
Col8a2P25318 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col8a2P25318 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.26□□□□□ -0.61
Col8a2P25318 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.26□□□□□ -0.61
Col8a2P25318 Gm43433-201ENSMUST00000196573 481 ntBASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms