Protein–RNA interactions for Protein: P12399

Ctla2a, Protein CTLA-2-alpha, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla2aP12399 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Ctla2aP12399 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ctla2aP12399 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ctla2aP12399 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ctla2aP12399 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ctla2aP12399 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ctla2aP12399 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ctla2aP12399 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ctla2aP12399 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.14□□□□□ -0.47
Ctla2aP12399 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ctla2aP12399 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ctla2aP12399 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ctla2aP12399 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ctla2aP12399 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ctla2aP12399 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ctla2aP12399 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ctla2aP12399 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ctla2aP12399 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ctla2aP12399 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ctla2aP12399 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ctla2aP12399 Gm24589-201ENSMUST00000116692 94 ntBASIC12.14□□□□□ -0.47
Ctla2aP12399 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.14□□□□□ -0.47
Ctla2aP12399 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.14□□□□□ -0.47
Ctla2aP12399 Gm9103-201ENSMUST00000119371 405 ntBASIC12.14□□□□□ -0.47
Ctla2aP12399 Gm15483-201ENSMUST00000120338 456 ntBASIC12.14□□□□□ -0.47
Ctla2aP12399 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.14□□□□□ -0.47
Ctla2aP12399 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.14□□□□□ -0.47
Ctla2aP12399 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.14□□□□□ -0.47
Ctla2aP12399 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ctla2aP12399 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ctla2aP12399 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ctla2aP12399 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ctla2aP12399 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ctla2aP12399 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ctla2aP12399 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ctla2aP12399 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ctla2aP12399 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ctla2aP12399 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ctla2aP12399 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ctla2aP12399 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ctla2aP12399 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ctla2aP12399 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ctla2aP12399 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ctla2aP12399 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ctla2aP12399 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ctla2aP12399 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ctla2aP12399 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ctla2aP12399 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ctla2aP12399 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Ctla2aP12399 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ctla2aP12399 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.13□□□□□ -0.47
Ctla2aP12399 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.13□□□□□ -0.47
Ctla2aP12399 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ctla2aP12399 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Ctla2aP12399 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ctla2aP12399 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.13□□□□□ -0.47
Ctla2aP12399 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ctla2aP12399 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ctla2aP12399 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ctla2aP12399 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ctla2aP12399 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.13□□□□□ -0.47
Ctla2aP12399 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Ctla2aP12399 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.13□□□□□ -0.47
Ctla2aP12399 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC12.13□□□□□ -0.47
Ctla2aP12399 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ctla2aP12399 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.13□□□□□ -0.47
Ctla2aP12399 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ctla2aP12399 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ctla2aP12399 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ctla2aP12399 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ctla2aP12399 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ctla2aP12399 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ctla2aP12399 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ctla2aP12399 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Ctla2aP12399 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ctla2aP12399 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ctla2aP12399 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ctla2aP12399 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.13□□□□□ -0.47
Ctla2aP12399 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ctla2aP12399 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ctla2aP12399 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ctla2aP12399 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ctla2aP12399 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ctla2aP12399 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.13□□□□□ -0.47
Ctla2aP12399 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ctla2aP12399 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ctla2aP12399 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ctla2aP12399 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ctla2aP12399 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ctla2aP12399 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.12□□□□□ -0.47
Ctla2aP12399 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ctla2aP12399 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ctla2aP12399 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ctla2aP12399 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ctla2aP12399 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.12□□□□□ -0.47
Ctla2aP12399 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Ctla2aP12399 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ctla2aP12399 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ctla2aP12399 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ctla2aP12399 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms