Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa3P02831 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.35□□□□□ -0.59
Hoxa3P02831 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa3P02831 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.35□□□□□ -0.59
Hoxa3P02831 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa3P02831 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC11.35□□□□□ -0.59
Hoxa3P02831 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa3P02831 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa3P02831 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Hoxa3P02831 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hoxa3P02831 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa3P02831 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa3P02831 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Hoxa3P02831 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.34□□□□□ -0.59
Hoxa3P02831 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Hoxa3P02831 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa3P02831 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.34□□□□□ -0.59
Hoxa3P02831 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa3P02831 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa3P02831 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Hoxa3P02831 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Hoxa3P02831 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa3P02831 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa3P02831 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.34□□□□□ -0.59
Hoxa3P02831 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa3P02831 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa3P02831 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.34□□□□□ -0.59
Hoxa3P02831 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Hoxa3P02831 Gm9002-201ENSMUST00000178437 499 ntBASIC11.34□□□□□ -0.59
Hoxa3P02831 Gm2495-201ENSMUST00000191160 466 ntBASIC11.34□□□□□ -0.59
Hoxa3P02831 AC149294.4-201ENSMUST00000227870 882 ntBASIC11.34□□□□□ -0.59
Hoxa3P02831 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa3P02831 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa3P02831 Gm25857-201ENSMUST00000082788 129 ntBASIC11.34□□□□□ -0.59
Hoxa3P02831 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa3P02831 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa3P02831 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa3P02831 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa3P02831 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa3P02831 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Hoxa3P02831 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.34□□□□□ -0.59
Hoxa3P02831 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa3P02831 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa3P02831 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa3P02831 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.34□□□□□ -0.59
Hoxa3P02831 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa3P02831 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa3P02831 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.34□□□□□ -0.59
Hoxa3P02831 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Hoxa3P02831 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa3P02831 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa3P02831 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa3P02831 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hoxa3P02831 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Hoxa3P02831 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa3P02831 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa3P02831 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.33□□□□□ -0.6
Hoxa3P02831 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa3P02831 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa3P02831 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa3P02831 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa3P02831 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa3P02831 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa3P02831 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa3P02831 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa3P02831 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa3P02831 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.33□□□□□ -0.6
Hoxa3P02831 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa3P02831 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.33□□□□□ -0.6
Hoxa3P02831 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa3P02831 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa3P02831 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa3P02831 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa3P02831 Gm17150-201ENSMUST00000165577 381 ntBASIC11.33□□□□□ -0.6
Hoxa3P02831 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa3P02831 Gm29741-201ENSMUST00000192667 421 ntBASIC11.33□□□□□ -0.6
Hoxa3P02831 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.33□□□□□ -0.6
Hoxa3P02831 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.33□□□□□ -0.6
Hoxa3P02831 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa3P02831 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.33□□□□□ -0.6
Hoxa3P02831 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Hoxa3P02831 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Hoxa3P02831 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa3P02831 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Hoxa3P02831 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa3P02831 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa3P02831 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Hoxa3P02831 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.33□□□□□ -0.6
Hoxa3P02831 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa3P02831 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa3P02831 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hoxa3P02831 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa3P02831 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa3P02831 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.32□□□□□ -0.6
Hoxa3P02831 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa3P02831 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa3P02831 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa3P02831 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hoxa3P02831 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
Hoxa3P02831 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms