Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
H3f3cP02301 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H3f3cP02301 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
H3f3cP02301 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
H3f3cP02301 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
H3f3cP02301 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
H3f3cP02301 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
H3f3cP02301 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
H3f3cP02301 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
H3f3cP02301 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.62□□□□□ -0.55
H3f3cP02301 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
H3f3cP02301 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
H3f3cP02301 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
H3f3cP02301 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
H3f3cP02301 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
H3f3cP02301 Gm7488-201ENSMUST00000117148 684 ntBASIC11.62□□□□□ -0.55
H3f3cP02301 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
H3f3cP02301 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H3f3cP02301 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
H3f3cP02301 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
H3f3cP02301 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
H3f3cP02301 Gm42612-201ENSMUST00000197986 623 ntBASIC11.62□□□□□ -0.55
H3f3cP02301 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H3f3cP02301 Gm43170-201ENSMUST00000199827 612 ntBASIC11.62□□□□□ -0.55
H3f3cP02301 Gm44855-201ENSMUST00000205725 362 ntBASIC11.62□□□□□ -0.55
H3f3cP02301 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.62□□□□□ -0.55
H3f3cP02301 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.62□□□□□ -0.55
H3f3cP02301 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H3f3cP02301 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H3f3cP02301 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H3f3cP02301 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
H3f3cP02301 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H3f3cP02301 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H3f3cP02301 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H3f3cP02301 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.62□□□□□ -0.55
H3f3cP02301 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
H3f3cP02301 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H3f3cP02301 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
H3f3cP02301 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.62□□□□□ -0.55
H3f3cP02301 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
H3f3cP02301 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.62□□□□□ -0.55
H3f3cP02301 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.62□□□□□ -0.55
H3f3cP02301 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.62□□□□□ -0.55
H3f3cP02301 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
H3f3cP02301 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H3f3cP02301 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
H3f3cP02301 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H3f3cP02301 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H3f3cP02301 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H3f3cP02301 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.62□□□□□ -0.55
H3f3cP02301 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H3f3cP02301 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
H3f3cP02301 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
H3f3cP02301 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.62□□□□□ -0.55
H3f3cP02301 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
H3f3cP02301 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
H3f3cP02301 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
H3f3cP02301 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
H3f3cP02301 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
H3f3cP02301 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
H3f3cP02301 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H3f3cP02301 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H3f3cP02301 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H3f3cP02301 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H3f3cP02301 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H3f3cP02301 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.61□□□□□ -0.55
H3f3cP02301 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
H3f3cP02301 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H3f3cP02301 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
H3f3cP02301 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H3f3cP02301 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H3f3cP02301 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
H3f3cP02301 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H3f3cP02301 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
H3f3cP02301 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.61□□□□□ -0.55
H3f3cP02301 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.61□□□□□ -0.55
H3f3cP02301 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.61□□□□□ -0.55
H3f3cP02301 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
H3f3cP02301 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H3f3cP02301 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
H3f3cP02301 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.61□□□□□ -0.55
H3f3cP02301 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
H3f3cP02301 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.61□□□□□ -0.55
H3f3cP02301 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.61□□□□□ -0.55
H3f3cP02301 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
H3f3cP02301 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
H3f3cP02301 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H3f3cP02301 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H3f3cP02301 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
H3f3cP02301 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
H3f3cP02301 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
H3f3cP02301 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
H3f3cP02301 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H3f3cP02301 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
H3f3cP02301 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.61□□□□□ -0.55
H3f3cP02301 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H3f3cP02301 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
H3f3cP02301 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H3f3cP02301 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
H3f3cP02301 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms