Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1bO88384 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.91□□□□□ -0.34
Vti1bO88384 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1bO88384 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1bO88384 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1bO88384 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.91□□□□□ -0.34
Vti1bO88384 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1bO88384 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Vti1bO88384 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vti1bO88384 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.9□□□□□ -0.34
Vti1bO88384 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1bO88384 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Vti1bO88384 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Vti1bO88384 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1bO88384 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1bO88384 Rubie-203ENSMUST00000227803 2430 ntBASIC12.9□□□□□ -0.34
Vti1bO88384 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.9□□□□□ -0.34
Vti1bO88384 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1bO88384 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1bO88384 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Vti1bO88384 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Vti1bO88384 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1bO88384 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.9□□□□□ -0.34
Vti1bO88384 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1bO88384 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1bO88384 Gm13223-201ENSMUST00000118609 747 ntBASIC12.9□□□□□ -0.34
Vti1bO88384 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.9□□□□□ -0.34
Vti1bO88384 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1bO88384 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1bO88384 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1bO88384 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.9□□□□□ -0.34
Vti1bO88384 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.9□□□□□ -0.34
Vti1bO88384 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1bO88384 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Vti1bO88384 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1bO88384 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1bO88384 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Vti1bO88384 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Vti1bO88384 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1bO88384 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1bO88384 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.9□□□□□ -0.34
Vti1bO88384 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1bO88384 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Vti1bO88384 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vti1bO88384 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Vti1bO88384 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Vti1bO88384 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1bO88384 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.89□□□□□ -0.35
Vti1bO88384 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.89□□□□□ -0.35
Vti1bO88384 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1bO88384 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1bO88384 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1bO88384 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1bO88384 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1bO88384 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1bO88384 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1bO88384 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Vti1bO88384 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1bO88384 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1bO88384 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1bO88384 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1bO88384 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1bO88384 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1bO88384 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Vti1bO88384 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Vti1bO88384 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1bO88384 Gm14767-201ENSMUST00000121559 586 ntBASIC12.89□□□□□ -0.35
Vti1bO88384 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1bO88384 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.89□□□□□ -0.35
Vti1bO88384 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1bO88384 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Vti1bO88384 Gm27680-201ENSMUST00000184192 160 ntBASIC12.89□□□□□ -0.35
Vti1bO88384 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1bO88384 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1bO88384 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.89□□□□□ -0.35
Vti1bO88384 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1bO88384 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Vti1bO88384 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1bO88384 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Vti1bO88384 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1bO88384 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1bO88384 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Vti1bO88384 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1bO88384 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Vti1bO88384 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.89□□□□□ -0.35
Vti1bO88384 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Vti1bO88384 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1bO88384 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1bO88384 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1bO88384 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vti1bO88384 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
Vti1bO88384 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1bO88384 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1bO88384 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1bO88384 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1bO88384 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1bO88384 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1bO88384 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1bO88384 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vti1bO88384 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms