Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nid2O88322 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nid2O88322 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nid2O88322 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nid2O88322 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nid2O88322 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nid2O88322 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC17.33■□□□□ 0.37
Nid2O88322 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.33■□□□□ 0.37
Nid2O88322 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nid2O88322 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Nid2O88322 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nid2O88322 Gm5846-201ENSMUST00000193146 1414 ntBASIC17.33■□□□□ 0.37
Nid2O88322 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Nid2O88322 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nid2O88322 Gm11930-201ENSMUST00000117788 190 ntBASIC17.33■□□□□ 0.36
Nid2O88322 Gm14109-201ENSMUST00000118814 309 ntBASIC17.33■□□□□ 0.36
Nid2O88322 Gm12201-201ENSMUST00000120657 1234 ntBASIC17.33■□□□□ 0.36
Nid2O88322 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Nid2O88322 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nid2O88322 AC135669.1-202ENSMUST00000216742 540 ntBASIC17.33■□□□□ 0.36
Nid2O88322 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nid2O88322 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nid2O88322 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nid2O88322 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nid2O88322 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nid2O88322 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nid2O88322 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Nid2O88322 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nid2O88322 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nid2O88322 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nid2O88322 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC17.33■□□□□ 0.36
Nid2O88322 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nid2O88322 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nid2O88322 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nid2O88322 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nid2O88322 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nid2O88322 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nid2O88322 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nid2O88322 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nid2O88322 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nid2O88322 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nid2O88322 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nid2O88322 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Nid2O88322 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC17.32■□□□□ 0.36
Nid2O88322 Gm6161-201ENSMUST00000121942 1102 ntBASIC17.32■□□□□ 0.36
Nid2O88322 Gm15547-201ENSMUST00000122152 333 ntBASIC17.32■□□□□ 0.36
Nid2O88322 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nid2O88322 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC17.32■□□□□ 0.36
Nid2O88322 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Nid2O88322 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nid2O88322 Gm6254-201ENSMUST00000168178 1072 ntBASIC17.32■□□□□ 0.36
Nid2O88322 Gm6153-201ENSMUST00000172004 1058 ntBASIC17.32■□□□□ 0.36
Nid2O88322 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Nid2O88322 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nid2O88322 Gm38297-201ENSMUST00000195122 1057 ntBASIC17.32■□□□□ 0.36
Nid2O88322 Gm5641-202ENSMUST00000198699 1080 ntBASIC17.32■□□□□ 0.36
Nid2O88322 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC17.32■□□□□ 0.36
Nid2O88322 AC166051.1-201ENSMUST00000214313 210 ntBASIC17.32■□□□□ 0.36
Nid2O88322 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Nid2O88322 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nid2O88322 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nid2O88322 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nid2O88322 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nid2O88322 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nid2O88322 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nid2O88322 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nid2O88322 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nid2O88322 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nid2O88322 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nid2O88322 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nid2O88322 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Nid2O88322 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nid2O88322 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Nid2O88322 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nid2O88322 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Nid2O88322 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Nid2O88322 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC17.31■□□□□ 0.36
Nid2O88322 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nid2O88322 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nid2O88322 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Nid2O88322 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nid2O88322 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nid2O88322 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nid2O88322 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nid2O88322 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Nid2O88322 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Nid2O88322 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nid2O88322 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nid2O88322 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nid2O88322 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nid2O88322 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.31■□□□□ 0.36
Nid2O88322 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nid2O88322 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nid2O88322 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nid2O88322 Gm23200-201ENSMUST00000104379 132 ntBASIC17.3■□□□□ 0.36
Nid2O88322 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Nid2O88322 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nid2O88322 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Nid2O88322 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nid2O88322 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms