Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.01□□□□□ -0.49
Col5a1O88207 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col5a1O88207 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col5a1O88207 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col5a1O88207 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col5a1O88207 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.01□□□□□ -0.49
Col5a1O88207 Gm24548-201ENSMUST00000158650 108 ntBASIC12.01□□□□□ -0.49
Col5a1O88207 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Col5a1O88207 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.01□□□□□ -0.49
Col5a1O88207 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.01□□□□□ -0.49
Col5a1O88207 Gm22121-201ENSMUST00000175148 54 ntBASIC12.01□□□□□ -0.49
Col5a1O88207 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Col5a1O88207 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.01□□□□□ -0.49
Col5a1O88207 Gm43378-201ENSMUST00000199336 582 ntBASIC12.01□□□□□ -0.49
Col5a1O88207 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.01□□□□□ -0.49
Col5a1O88207 Gm18212-201ENSMUST00000211678 889 ntBASIC12.01□□□□□ -0.49
Col5a1O88207 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.01□□□□□ -0.49
Col5a1O88207 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.01□□□□□ -0.49
Col5a1O88207 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.01□□□□□ -0.49
Col5a1O88207 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col5a1O88207 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col5a1O88207 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Col5a1O88207 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col5a1O88207 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col5a1O88207 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.01□□□□□ -0.49
Col5a1O88207 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col5a1O88207 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col5a1O88207 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col5a1O88207 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col5a1O88207 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Col5a1O88207 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col5a1O88207 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col5a1O88207 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col5a1O88207 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Col5a1O88207 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Col5a1O88207 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col5a1O88207 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col5a1O88207 Gm12616-201ENSMUST00000118594 382 ntBASIC12□□□□□ -0.49
Col5a1O88207 Gm9083-201ENSMUST00000120423 819 ntBASIC12□□□□□ -0.49
Col5a1O88207 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12□□□□□ -0.49
Col5a1O88207 Gm2231-201ENSMUST00000125661 612 ntBASIC12□□□□□ -0.49
Col5a1O88207 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col5a1O88207 Gm12624-201ENSMUST00000177615 382 ntBASIC12□□□□□ -0.49
Col5a1O88207 Gm12621-201ENSMUST00000177760 382 ntBASIC12□□□□□ -0.49
Col5a1O88207 Gm12615-201ENSMUST00000177970 382 ntBASIC12□□□□□ -0.49
Col5a1O88207 Gm12622-201ENSMUST00000177975 382 ntBASIC12□□□□□ -0.49
Col5a1O88207 Gm12627-201ENSMUST00000178412 382 ntBASIC12□□□□□ -0.49
Col5a1O88207 Gm12625-201ENSMUST00000179122 382 ntBASIC12□□□□□ -0.49
Col5a1O88207 Gm12614-201ENSMUST00000179586 382 ntBASIC12□□□□□ -0.49
Col5a1O88207 Gm12613-201ENSMUST00000180323 382 ntBASIC12□□□□□ -0.49
Col5a1O88207 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12□□□□□ -0.49
Col5a1O88207 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12□□□□□ -0.49
Col5a1O88207 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col5a1O88207 Gm44545-201ENSMUST00000208262 746 ntBASIC12□□□□□ -0.49
Col5a1O88207 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12□□□□□ -0.49
Col5a1O88207 Gm18615-201ENSMUST00000222919 1031 ntBASIC12□□□□□ -0.49
Col5a1O88207 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col5a1O88207 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12□□□□□ -0.49
Col5a1O88207 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col5a1O88207 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Col5a1O88207 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Col5a1O88207 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Col5a1O88207 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col5a1O88207 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col5a1O88207 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col5a1O88207 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col5a1O88207 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12□□□□□ -0.49
Col5a1O88207 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Col5a1O88207 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Col5a1O88207 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12□□□□□ -0.49
Col5a1O88207 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Col5a1O88207 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12□□□□□ -0.49
Col5a1O88207 Gm13570-201ENSMUST00000140763 309 ntBASIC12□□□□□ -0.49
Col5a1O88207 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Col5a1O88207 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12□□□□□ -0.49
Col5a1O88207 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Col5a1O88207 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col5a1O88207 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12□□□□□ -0.49
Col5a1O88207 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Col5a1O88207 Gm38297-201ENSMUST00000195122 1057 ntBASIC12□□□□□ -0.49
Col5a1O88207 Gm44100-201ENSMUST00000204329 436 ntBASIC12□□□□□ -0.49
Col5a1O88207 Gm44126-201ENSMUST00000204831 514 ntBASIC12□□□□□ -0.49
Col5a1O88207 Gm6458-201ENSMUST00000211573 635 ntBASIC12□□□□□ -0.49
Col5a1O88207 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12□□□□□ -0.49
Col5a1O88207 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12□□□□□ -0.49
Col5a1O88207 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col5a1O88207 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col5a1O88207 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Col5a1O88207 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col5a1O88207 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col5a1O88207 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col5a1O88207 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col5a1O88207 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col5a1O88207 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col5a1O88207 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.99□□□□□ -0.49
Col5a1O88207 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col5a1O88207 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col5a1O88207 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col5a1O88207 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col5a1O88207 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms