Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ubr1O70481 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ubr1O70481 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC17.19■□□□□ 0.34
Ubr1O70481 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Ubr1O70481 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ubr1O70481 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ubr1O70481 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ubr1O70481 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ubr1O70481 Gm8908-201ENSMUST00000121633 1024 ntBASIC17.19■□□□□ 0.34
Ubr1O70481 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ubr1O70481 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC17.19■□□□□ 0.34
Ubr1O70481 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ubr1O70481 Gm43068-201ENSMUST00000201095 1273 ntBASIC17.19■□□□□ 0.34
Ubr1O70481 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC17.19■□□□□ 0.34
Ubr1O70481 Gm19963-201ENSMUST00000208413 1255 ntBASIC17.19■□□□□ 0.34
Ubr1O70481 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ubr1O70481 AC123857.2-201ENSMUST00000225756 1582 ntBASIC17.19■□□□□ 0.34
Ubr1O70481 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ubr1O70481 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ubr1O70481 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ubr1O70481 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ubr1O70481 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ubr1O70481 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ubr1O70481 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ubr1O70481 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ubr1O70481 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC17.18■□□□□ 0.34
Ubr1O70481 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ubr1O70481 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ubr1O70481 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ubr1O70481 Gm14109-201ENSMUST00000118814 309 ntBASIC17.18■□□□□ 0.34
Ubr1O70481 Gm4760-201ENSMUST00000119663 1030 ntBASIC17.18■□□□□ 0.34
Ubr1O70481 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ubr1O70481 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ubr1O70481 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ubr1O70481 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ubr1O70481 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.18■□□□□ 0.34
Ubr1O70481 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ubr1O70481 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ubr1O70481 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ubr1O70481 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ubr1O70481 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ubr1O70481 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ubr1O70481 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ubr1O70481 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ubr1O70481 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ubr1O70481 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Ubr1O70481 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ubr1O70481 Gm14130-201ENSMUST00000118417 987 ntBASIC17.17■□□□□ 0.34
Ubr1O70481 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
Ubr1O70481 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC17.17■□□□□ 0.34
Ubr1O70481 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Ubr1O70481 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC17.17■□□□□ 0.34
Ubr1O70481 Gm2260-201ENSMUST00000184965 657 ntBASIC17.17■□□□□ 0.34
Ubr1O70481 Gm31256-201ENSMUST00000194705 506 ntBASIC17.17■□□□□ 0.34
Ubr1O70481 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC17.17■□□□□ 0.34
Ubr1O70481 Gm5950-201ENSMUST00000213337 772 ntBASIC17.17■□□□□ 0.34
Ubr1O70481 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC17.17■□□□□ 0.34
Ubr1O70481 CT025533.2-201ENSMUST00000228715 1248 ntBASIC17.17■□□□□ 0.34
Ubr1O70481 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubr1O70481 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ubr1O70481 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubr1O70481 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubr1O70481 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubr1O70481 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubr1O70481 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC17.17■□□□□ 0.34
Ubr1O70481 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubr1O70481 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC17.17■□□□□ 0.34
Ubr1O70481 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubr1O70481 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ubr1O70481 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubr1O70481 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubr1O70481 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubr1O70481 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubr1O70481 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ubr1O70481 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC17.17■□□□□ 0.34
Ubr1O70481 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ubr1O70481 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr1O70481 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr1O70481 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr1O70481 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr1O70481 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr1O70481 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
Ubr1O70481 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC17.16■□□□□ 0.34
Ubr1O70481 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr1O70481 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr1O70481 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr1O70481 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr1O70481 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr1O70481 Gm13570-201ENSMUST00000140763 309 ntBASIC17.16■□□□□ 0.34
Ubr1O70481 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr1O70481 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Ubr1O70481 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr1O70481 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr1O70481 Ighv5-7-201ENSMUST00000192302 244 ntBASIC17.16■□□□□ 0.34
Ubr1O70481 Gm19931-201ENSMUST00000198920 368 ntBASIC17.16■□□□□ 0.34
Ubr1O70481 Gm39404-201ENSMUST00000216350 313 ntBASIC17.16■□□□□ 0.34
Ubr1O70481 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC17.16■□□□□ 0.34
Ubr1O70481 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ubr1O70481 Gm7789-202ENSMUST00000211273 1400 ntBASIC17.16■□□□□ 0.34
Ubr1O70481 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms