Protein–RNA interactions for Protein: O70258

Sgce, Epsilon-sarcoglycan, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgceO70258 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgceO70258 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgceO70258 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgceO70258 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SgceO70258 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SgceO70258 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgceO70258 Gm15920-201ENSMUST00000118998 402 ntBASIC12.12□□□□□ -0.47
SgceO70258 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgceO70258 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SgceO70258 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SgceO70258 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.12□□□□□ -0.47
SgceO70258 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.12□□□□□ -0.47
SgceO70258 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SgceO70258 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
SgceO70258 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.12□□□□□ -0.47
SgceO70258 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SgceO70258 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.12□□□□□ -0.47
SgceO70258 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgceO70258 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgceO70258 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
SgceO70258 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SgceO70258 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgceO70258 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.12□□□□□ -0.47
SgceO70258 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgceO70258 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SgceO70258 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SgceO70258 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgceO70258 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SgceO70258 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgceO70258 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgceO70258 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.12□□□□□ -0.47
SgceO70258 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgceO70258 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgceO70258 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgceO70258 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.12□□□□□ -0.47
SgceO70258 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgceO70258 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgceO70258 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SgceO70258 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgceO70258 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgceO70258 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
SgceO70258 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgceO70258 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgceO70258 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SgceO70258 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
SgceO70258 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.11□□□□□ -0.47
SgceO70258 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgceO70258 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
SgceO70258 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgceO70258 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
SgceO70258 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgceO70258 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SgceO70258 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgceO70258 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgceO70258 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SgceO70258 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgceO70258 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SgceO70258 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgceO70258 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgceO70258 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.11□□□□□ -0.47
SgceO70258 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgceO70258 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgceO70258 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgceO70258 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgceO70258 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.11□□□□□ -0.47
SgceO70258 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SgceO70258 Gm24420-201ENSMUST00000176676 59 ntBASIC12.11□□□□□ -0.47
SgceO70258 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.11□□□□□ -0.47
SgceO70258 Gm27306-201ENSMUST00000183970 107 ntBASIC12.11□□□□□ -0.47
SgceO70258 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.11□□□□□ -0.47
SgceO70258 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgceO70258 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgceO70258 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgceO70258 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgceO70258 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgceO70258 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
SgceO70258 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgceO70258 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgceO70258 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgceO70258 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
SgceO70258 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgceO70258 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgceO70258 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgceO70258 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgceO70258 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgceO70258 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SgceO70258 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
SgceO70258 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SgceO70258 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgceO70258 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SgceO70258 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgceO70258 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SgceO70258 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgceO70258 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.1□□□□□ -0.47
SgceO70258 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.1□□□□□ -0.47
SgceO70258 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgceO70258 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.1□□□□□ -0.47
SgceO70258 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.1□□□□□ -0.47
SgceO70258 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SgceO70258 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms