Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.41□□□□□ -0.42
Alx3O70137 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Alx3O70137 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Alx3O70137 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Alx3O70137 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Alx3O70137 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Alx3O70137 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Alx3O70137 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Alx3O70137 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Alx3O70137 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Alx3O70137 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Alx3O70137 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.41□□□□□ -0.42
Alx3O70137 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Alx3O70137 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Alx3O70137 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Alx3O70137 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Alx3O70137 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Alx3O70137 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Alx3O70137 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Alx3O70137 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Alx3O70137 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Alx3O70137 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Alx3O70137 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.4□□□□□ -0.42
Alx3O70137 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Alx3O70137 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Alx3O70137 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Alx3O70137 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Alx3O70137 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.4□□□□□ -0.42
Alx3O70137 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Alx3O70137 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.4□□□□□ -0.42
Alx3O70137 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Alx3O70137 Chchd1-203ENSMUST00000224633 557 ntBASIC12.4□□□□□ -0.42
Alx3O70137 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Alx3O70137 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Alx3O70137 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Alx3O70137 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Alx3O70137 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Alx3O70137 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Alx3O70137 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Alx3O70137 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Alx3O70137 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Alx3O70137 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Alx3O70137 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Alx3O70137 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.4□□□□□ -0.42
Alx3O70137 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Alx3O70137 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Alx3O70137 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Alx3O70137 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx3O70137 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.39□□□□□ -0.43
Alx3O70137 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Alx3O70137 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx3O70137 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx3O70137 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Alx3O70137 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx3O70137 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Alx3O70137 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx3O70137 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC12.39□□□□□ -0.43
Alx3O70137 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx3O70137 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Alx3O70137 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Alx3O70137 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx3O70137 Gm24543-201ENSMUST00000103867 82 ntBASIC12.39□□□□□ -0.43
Alx3O70137 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx3O70137 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC12.39□□□□□ -0.43
Alx3O70137 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.39□□□□□ -0.43
Alx3O70137 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.39□□□□□ -0.43
Alx3O70137 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Alx3O70137 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Alx3O70137 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx3O70137 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx3O70137 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx3O70137 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx3O70137 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx3O70137 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx3O70137 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx3O70137 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Alx3O70137 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Alx3O70137 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx3O70137 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx3O70137 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx3O70137 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Alx3O70137 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx3O70137 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx3O70137 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Alx3O70137 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.38□□□□□ -0.43
Alx3O70137 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Alx3O70137 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.38□□□□□ -0.43
Alx3O70137 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Alx3O70137 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Alx3O70137 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Alx3O70137 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.38□□□□□ -0.43
Alx3O70137 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Alx3O70137 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Alx3O70137 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Alx3O70137 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Alx3O70137 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Alx3O70137 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.38□□□□□ -0.43
Alx3O70137 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Alx3O70137 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Alx3O70137 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms