Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Matn3O35701 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.28□□□□□ -0.44
Matn3O35701 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Matn3O35701 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Matn3O35701 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Matn3O35701 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.28□□□□□ -0.44
Matn3O35701 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Matn3O35701 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Matn3O35701 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Matn3O35701 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.28□□□□□ -0.44
Matn3O35701 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Matn3O35701 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Matn3O35701 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Matn3O35701 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Matn3O35701 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Matn3O35701 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Matn3O35701 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Matn3O35701 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.27□□□□□ -0.44
Matn3O35701 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Matn3O35701 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Matn3O35701 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Matn3O35701 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Matn3O35701 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Matn3O35701 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Matn3O35701 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Matn3O35701 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Matn3O35701 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Matn3O35701 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Matn3O35701 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.27□□□□□ -0.45
Matn3O35701 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Matn3O35701 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Matn3O35701 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Matn3O35701 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Matn3O35701 Gm4995-201ENSMUST00000117247 432 ntBASIC12.27□□□□□ -0.45
Matn3O35701 Gm14822-201ENSMUST00000122247 291 ntBASIC12.27□□□□□ -0.45
Matn3O35701 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Matn3O35701 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.27□□□□□ -0.45
Matn3O35701 Mir3113-201ENSMUST00000175478 76 ntBASIC12.27□□□□□ -0.45
Matn3O35701 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Matn3O35701 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Matn3O35701 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Matn3O35701 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Matn3O35701 Gm10175-201ENSMUST00000086013 645 ntBASIC12.27□□□□□ -0.45
Matn3O35701 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Matn3O35701 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Matn3O35701 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Matn3O35701 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Matn3O35701 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Matn3O35701 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Matn3O35701 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Matn3O35701 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Matn3O35701 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Matn3O35701 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Matn3O35701 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Matn3O35701 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Matn3O35701 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Matn3O35701 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Matn3O35701 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Matn3O35701 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Matn3O35701 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Matn3O35701 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Matn3O35701 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Matn3O35701 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Matn3O35701 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.26□□□□□ -0.45
Matn3O35701 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.26□□□□□ -0.45
Matn3O35701 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Matn3O35701 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Matn3O35701 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Matn3O35701 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Matn3O35701 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Matn3O35701 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Matn3O35701 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.26□□□□□ -0.45
Matn3O35701 Gm13597-201ENSMUST00000121239 375 ntBASIC12.26□□□□□ -0.45
Matn3O35701 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Matn3O35701 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Matn3O35701 Gm29741-201ENSMUST00000192667 421 ntBASIC12.26□□□□□ -0.45
Matn3O35701 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.26□□□□□ -0.45
Matn3O35701 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.26□□□□□ -0.45
Matn3O35701 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Matn3O35701 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Matn3O35701 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Matn3O35701 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Matn3O35701 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.26□□□□□ -0.45
Matn3O35701 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Matn3O35701 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Matn3O35701 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.26□□□□□ -0.45
Matn3O35701 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Matn3O35701 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Matn3O35701 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Matn3O35701 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Matn3O35701 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Matn3O35701 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Matn3O35701 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Matn3O35701 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Matn3O35701 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.25□□□□□ -0.45
Matn3O35701 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.25□□□□□ -0.45
Matn3O35701 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Matn3O35701 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Matn3O35701 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Matn3O35701 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms