Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Gm18753-201ENSMUST00000201000 566 ntBASIC17.12■□□□□ 0.33
Col15a1O35206 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col15a1O35206 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col15a1O35206 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Col15a1O35206 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Col15a1O35206 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col15a1O35206 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col15a1O35206 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col15a1O35206 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col15a1O35206 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Col15a1O35206 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC17.11■□□□□ 0.33
Col15a1O35206 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC17.11■□□□□ 0.33
Col15a1O35206 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Col15a1O35206 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col15a1O35206 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col15a1O35206 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col15a1O35206 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Col15a1O35206 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Col15a1O35206 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col15a1O35206 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col15a1O35206 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col15a1O35206 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col15a1O35206 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col15a1O35206 CT009713.10-201ENSMUST00000225013 1986 ntBASIC17.11■□□□□ 0.33
Col15a1O35206 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col15a1O35206 Gm11531-201ENSMUST00000117614 555 ntBASIC17.11■□□□□ 0.33
Col15a1O35206 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC17.11■□□□□ 0.33
Col15a1O35206 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC17.11■□□□□ 0.33
Col15a1O35206 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC17.11■□□□□ 0.33
Col15a1O35206 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC17.11■□□□□ 0.33
Col15a1O35206 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC17.11■□□□□ 0.33
Col15a1O35206 Gm9445-201ENSMUST00000207454 1285 ntBASIC17.11■□□□□ 0.33
Col15a1O35206 Gm44772-201ENSMUST00000207623 1191 ntBASIC17.11■□□□□ 0.33
Col15a1O35206 AC166051.1-201ENSMUST00000214313 210 ntBASIC17.11■□□□□ 0.33
Col15a1O35206 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC17.11■□□□□ 0.33
Col15a1O35206 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col15a1O35206 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col15a1O35206 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Col15a1O35206 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col15a1O35206 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Col15a1O35206 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.11■□□□□ 0.33
Col15a1O35206 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col15a1O35206 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col15a1O35206 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col15a1O35206 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col15a1O35206 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col15a1O35206 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Col15a1O35206 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col15a1O35206 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col15a1O35206 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col15a1O35206 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Col15a1O35206 AC139054.1-201ENSMUST00000226898 1598 ntBASIC17.1■□□□□ 0.33
Col15a1O35206 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC17.1■□□□□ 0.33
Col15a1O35206 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC17.1■□□□□ 0.33
Col15a1O35206 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC17.1■□□□□ 0.33
Col15a1O35206 Gm5869-201ENSMUST00000200248 1257 ntBASIC17.1■□□□□ 0.33
Col15a1O35206 Rps4l-202ENSMUST00000204242 789 ntBASIC17.1■□□□□ 0.33
Col15a1O35206 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC17.1■□□□□ 0.33
Col15a1O35206 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col15a1O35206 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col15a1O35206 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Col15a1O35206 AC167669.2-201ENSMUST00000224417 1620 ntBASIC17.1■□□□□ 0.33
Col15a1O35206 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col15a1O35206 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col15a1O35206 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col15a1O35206 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col15a1O35206 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC17.1■□□□□ 0.33
Col15a1O35206 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col15a1O35206 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col15a1O35206 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col15a1O35206 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col15a1O35206 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col15a1O35206 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col15a1O35206 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col15a1O35206 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col15a1O35206 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col15a1O35206 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC17.09■□□□□ 0.33
Col15a1O35206 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col15a1O35206 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col15a1O35206 Gm24990-201ENSMUST00000157406 323 ntBASIC17.09■□□□□ 0.33
Col15a1O35206 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC17.09■□□□□ 0.33
Col15a1O35206 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC17.09■□□□□ 0.33
Col15a1O35206 Gm5950-201ENSMUST00000213337 772 ntBASIC17.09■□□□□ 0.33
Col15a1O35206 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col15a1O35206 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col15a1O35206 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Col15a1O35206 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Col15a1O35206 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col15a1O35206 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col15a1O35206 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col15a1O35206 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC17.09■□□□□ 0.33
Col15a1O35206 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col15a1O35206 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col15a1O35206 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col15a1O35206 Gm8862-201ENSMUST00000198379 1346 ntBASIC17.09■□□□□ 0.33
Col15a1O35206 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.09■□□□□ 0.33
Col15a1O35206 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Col15a1O35206 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Col15a1O35206 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col15a1O35206 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms