Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf3O08791 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf3O08791 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ebf3O08791 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Ebf3O08791 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf3O08791 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Ebf3O08791 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf3O08791 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.04□□□□□ -0.16
Ebf3O08791 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.04□□□□□ -0.16
Ebf3O08791 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf3O08791 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Ebf3O08791 Gm38223-201ENSMUST00000194484 695 ntBASIC14.04□□□□□ -0.16
Ebf3O08791 Gm44397-201ENSMUST00000195950 113 ntBASIC14.04□□□□□ -0.16
Ebf3O08791 Grk6-205ENSMUST00000224653 2976 ntBASIC14.04□□□□□ -0.16
Ebf3O08791 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf3O08791 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ebf3O08791 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf3O08791 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf3O08791 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf3O08791 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf3O08791 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.04□□□□□ -0.16
Ebf3O08791 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf3O08791 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Ebf3O08791 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf3O08791 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf3O08791 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf3O08791 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ebf3O08791 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf3O08791 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf3O08791 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf3O08791 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ebf3O08791 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf3O08791 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf3O08791 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf3O08791 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf3O08791 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf3O08791 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf3O08791 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ebf3O08791 Gm13612-201ENSMUST00000119276 390 ntBASIC14.03□□□□□ -0.16
Ebf3O08791 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Ebf3O08791 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Ebf3O08791 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.03□□□□□ -0.16
Ebf3O08791 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.03□□□□□ -0.16
Ebf3O08791 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.03□□□□□ -0.16
Ebf3O08791 Gm29741-201ENSMUST00000192667 421 ntBASIC14.03□□□□□ -0.16
Ebf3O08791 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.03□□□□□ -0.16
Ebf3O08791 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ebf3O08791 Gm10012-201ENSMUST00000078252 192 ntBASIC14.03□□□□□ -0.16
Ebf3O08791 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.03□□□□□ -0.16
Ebf3O08791 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf3O08791 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.03□□□□□ -0.16
Ebf3O08791 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ebf3O08791 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ebf3O08791 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf3O08791 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf3O08791 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf3O08791 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.03□□□□□ -0.16
Ebf3O08791 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf3O08791 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf3O08791 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf3O08791 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ebf3O08791 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ebf3O08791 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ebf3O08791 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Ebf3O08791 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ebf3O08791 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.02□□□□□ -0.16
Ebf3O08791 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.02□□□□□ -0.16
Ebf3O08791 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Ebf3O08791 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Ebf3O08791 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ebf3O08791 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ebf3O08791 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ebf3O08791 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Ebf3O08791 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ebf3O08791 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ebf3O08791 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Ebf3O08791 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.02□□□□□ -0.16
Ebf3O08791 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ebf3O08791 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ebf3O08791 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.02□□□□□ -0.17
Ebf3O08791 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.02□□□□□ -0.17
Ebf3O08791 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.02□□□□□ -0.17
Ebf3O08791 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Ebf3O08791 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ebf3O08791 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.02□□□□□ -0.17
Ebf3O08791 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.02□□□□□ -0.17
Ebf3O08791 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.02□□□□□ -0.17
Ebf3O08791 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ebf3O08791 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ebf3O08791 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ebf3O08791 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ebf3O08791 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ebf3O08791 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ebf3O08791 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ebf3O08791 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ebf3O08791 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ebf3O08791 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ebf3O08791 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ebf3O08791 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ebf3O08791 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms