Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube4aE9Q735 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube4aE9Q735 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC16.15■□□□□ 0.18
Ube4aE9Q735 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC16.15■□□□□ 0.18
Ube4aE9Q735 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ube4aE9Q735 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC16.15■□□□□ 0.18
Ube4aE9Q735 Rassf8-202ENSMUST00000058538 1131 ntBASIC16.15■□□□□ 0.18
Ube4aE9Q735 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube4aE9Q735 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube4aE9Q735 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube4aE9Q735 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube4aE9Q735 Gm43423-201ENSMUST00000198390 2094 ntBASIC16.15■□□□□ 0.18
Ube4aE9Q735 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.15■□□□□ 0.18
Ube4aE9Q735 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube4aE9Q735 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ube4aE9Q735 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube4aE9Q735 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC16.14■□□□□ 0.17
Ube4aE9Q735 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ube4aE9Q735 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC16.14■□□□□ 0.17
Ube4aE9Q735 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube4aE9Q735 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ube4aE9Q735 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube4aE9Q735 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC16.14■□□□□ 0.17
Ube4aE9Q735 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube4aE9Q735 Gm11978-201ENSMUST00000122315 466 ntBASIC16.14■□□□□ 0.17
Ube4aE9Q735 Gm28693-202ENSMUST00000190758 331 ntBASIC16.14■□□□□ 0.17
Ube4aE9Q735 Gm43822-201ENSMUST00000200285 476 ntBASIC16.14■□□□□ 0.17
Ube4aE9Q735 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC16.14■□□□□ 0.17
Ube4aE9Q735 Olfr284-202ENSMUST00000206647 966 ntBASIC16.14■□□□□ 0.17
Ube4aE9Q735 Gm18935-201ENSMUST00000212692 664 ntBASIC16.14■□□□□ 0.17
Ube4aE9Q735 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC16.14■□□□□ 0.17
Ube4aE9Q735 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC16.14■□□□□ 0.17
Ube4aE9Q735 Gm19163-201ENSMUST00000223313 780 ntBASIC16.14■□□□□ 0.17
Ube4aE9Q735 AC022775.2-201ENSMUST00000227885 646 ntBASIC16.14■□□□□ 0.17
Ube4aE9Q735 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube4aE9Q735 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube4aE9Q735 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC16.14■□□□□ 0.17
Ube4aE9Q735 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ube4aE9Q735 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ube4aE9Q735 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube4aE9Q735 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube4aE9Q735 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube4aE9Q735 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube4aE9Q735 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ube4aE9Q735 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Ube4aE9Q735 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4aE9Q735 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4aE9Q735 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4aE9Q735 Gm43273-201ENSMUST00000199649 2594 ntBASIC16.13■□□□□ 0.17
Ube4aE9Q735 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4aE9Q735 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4aE9Q735 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4aE9Q735 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ube4aE9Q735 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4aE9Q735 Gm13786-201ENSMUST00000122371 333 ntBASIC16.13■□□□□ 0.17
Ube4aE9Q735 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4aE9Q735 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC16.13■□□□□ 0.17
Ube4aE9Q735 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC16.13■□□□□ 0.17
Ube4aE9Q735 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC16.13■□□□□ 0.17
Ube4aE9Q735 Gm4768-201ENSMUST00000206199 686 ntBASIC16.13■□□□□ 0.17
Ube4aE9Q735 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4aE9Q735 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4aE9Q735 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4aE9Q735 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4aE9Q735 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ube4aE9Q735 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4aE9Q735 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4aE9Q735 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4aE9Q735 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4aE9Q735 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4aE9Q735 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4aE9Q735 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4aE9Q735 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4aE9Q735 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4aE9Q735 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4aE9Q735 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4aE9Q735 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ube4aE9Q735 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC16.13■□□□□ 0.17
Ube4aE9Q735 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube4aE9Q735 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube4aE9Q735 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube4aE9Q735 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube4aE9Q735 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube4aE9Q735 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube4aE9Q735 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube4aE9Q735 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube4aE9Q735 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ube4aE9Q735 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC16.12■□□□□ 0.17
Ube4aE9Q735 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ube4aE9Q735 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC16.12■□□□□ 0.17
Ube4aE9Q735 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC16.12■□□□□ 0.17
Ube4aE9Q735 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC16.12■□□□□ 0.17
Ube4aE9Q735 AC135669.1-202ENSMUST00000216742 540 ntBASIC16.12■□□□□ 0.17
Ube4aE9Q735 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC16.12■□□□□ 0.17
Ube4aE9Q735 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
Ube4aE9Q735 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube4aE9Q735 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube4aE9Q735 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ube4aE9Q735 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ube4aE9Q735 AC153366.2-201ENSMUST00000219461 1984 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms