Protein–RNA interactions for Protein: E9Q414

Apob, Apolipoprotein B-100, mousemouse

Predictions only

Length 4,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApobE9Q414 Mir219a-1-201ENSMUST00000083621 110 ntBASIC8.02□□□□□ -1.13
ApobE9Q414 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
ApobE9Q414 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
ApobE9Q414 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
ApobE9Q414 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
ApobE9Q414 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC8.02□□□□□ -1.13
ApobE9Q414 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
ApobE9Q414 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
ApobE9Q414 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC8.02□□□□□ -1.13
ApobE9Q414 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
ApobE9Q414 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC8.02□□□□□ -1.13
ApobE9Q414 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
ApobE9Q414 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC8.02□□□□□ -1.13
ApobE9Q414 Gm4993-201ENSMUST00000118719 1174 ntBASIC8.02□□□□□ -1.13
ApobE9Q414 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC8.02□□□□□ -1.13
ApobE9Q414 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC8.02□□□□□ -1.13
ApobE9Q414 AC166095.1-201ENSMUST00000223731 1241 ntBASIC8.02□□□□□ -1.13
ApobE9Q414 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
ApobE9Q414 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC8.02□□□□□ -1.13
ApobE9Q414 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
ApobE9Q414 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
ApobE9Q414 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC8.02□□□□□ -1.13
ApobE9Q414 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
ApobE9Q414 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
ApobE9Q414 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
ApobE9Q414 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC8.02□□□□□ -1.13
ApobE9Q414 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
ApobE9Q414 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
ApobE9Q414 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
ApobE9Q414 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
ApobE9Q414 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC8.01□□□□□ -1.13
ApobE9Q414 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
ApobE9Q414 Gm13408-201ENSMUST00000119822 798 ntBASIC8.01□□□□□ -1.13
ApobE9Q414 Gm13813-201ENSMUST00000120998 787 ntBASIC8.01□□□□□ -1.13
ApobE9Q414 Gm13935-201ENSMUST00000121859 798 ntBASIC8.01□□□□□ -1.13
ApobE9Q414 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC8.01□□□□□ -1.13
ApobE9Q414 Gm6254-201ENSMUST00000168178 1072 ntBASIC8.01□□□□□ -1.13
ApobE9Q414 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC8.01□□□□□ -1.13
ApobE9Q414 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC8.01□□□□□ -1.13
ApobE9Q414 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
ApobE9Q414 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
ApobE9Q414 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
ApobE9Q414 Tmed9-203ENSMUST00000224741 1450 ntBASIC8.01□□□□□ -1.13
ApobE9Q414 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
ApobE9Q414 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
ApobE9Q414 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
ApobE9Q414 Gm12165-201ENSMUST00000117047 342 ntBASIC8.01□□□□□ -1.13
ApobE9Q414 Gm12134-201ENSMUST00000122109 520 ntBASIC8.01□□□□□ -1.13
ApobE9Q414 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC8.01□□□□□ -1.13
ApobE9Q414 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC8.01□□□□□ -1.13
ApobE9Q414 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
ApobE9Q414 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
ApobE9Q414 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
ApobE9Q414 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
ApobE9Q414 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
ApobE9Q414 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
ApobE9Q414 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
ApobE9Q414 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC8.01□□□□□ -1.13
ApobE9Q414 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC8.01□□□□□ -1.13
ApobE9Q414 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
ApobE9Q414 Gm26361-201ENSMUST00000158868 186 ntBASIC8.01□□□□□ -1.13
ApobE9Q414 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
ApobE9Q414 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
ApobE9Q414 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC8.01□□□□□ -1.13
ApobE9Q414 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC8.01□□□□□ -1.13
ApobE9Q414 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
ApobE9Q414 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
ApobE9Q414 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
ApobE9Q414 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
ApobE9Q414 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
ApobE9Q414 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
ApobE9Q414 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC8.01□□□□□ -1.13
ApobE9Q414 AC167013.2-201ENSMUST00000228520 2684 ntBASIC8.01□□□□□ -1.13
ApobE9Q414 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
ApobE9Q414 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
ApobE9Q414 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC8.01□□□□□ -1.13
ApobE9Q414 Gm6161-201ENSMUST00000121942 1102 ntBASIC8.01□□□□□ -1.13
ApobE9Q414 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
ApobE9Q414 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
ApobE9Q414 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
ApobE9Q414 Gm6153-201ENSMUST00000172004 1058 ntBASIC8.01□□□□□ -1.13
ApobE9Q414 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
ApobE9Q414 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
ApobE9Q414 Gm37905-201ENSMUST00000195310 341 ntBASIC8.01□□□□□ -1.13
ApobE9Q414 Gm5641-202ENSMUST00000198699 1080 ntBASIC8.01□□□□□ -1.13
ApobE9Q414 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC8.01□□□□□ -1.13
ApobE9Q414 Spcs1-203ENSMUST00000226374 592 ntBASIC8.01□□□□□ -1.13
ApobE9Q414 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
ApobE9Q414 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
ApobE9Q414 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC8□□□□□ -1.13
ApobE9Q414 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC8□□□□□ -1.13
ApobE9Q414 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
ApobE9Q414 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
ApobE9Q414 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
ApobE9Q414 Gm4864-201ENSMUST00000219894 1461 ntBASIC8□□□□□ -1.13
ApobE9Q414 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC8□□□□□ -1.13
ApobE9Q414 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
ApobE9Q414 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
ApobE9Q414 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC8□□□□□ -1.13
ApobE9Q414 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC8□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms