Protein–RNA interactions for Protein: E9PX29

Sptbn4, Spectrin beta chain, mousemouse

Predictions only

Length 2,561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4E9PX29 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sptbn4E9PX29 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sptbn4E9PX29 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sptbn4E9PX29 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sptbn4E9PX29 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sptbn4E9PX29 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sptbn4E9PX29 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sptbn4E9PX29 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sptbn4E9PX29 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sptbn4E9PX29 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sptbn4E9PX29 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sptbn4E9PX29 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sptbn4E9PX29 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sptbn4E9PX29 Gm11930-201ENSMUST00000117788 190 ntBASIC12.03□□□□□ -0.48
Sptbn4E9PX29 Mir3060-201ENSMUST00000175339 83 ntBASIC12.03□□□□□ -0.48
Sptbn4E9PX29 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC12.03□□□□□ -0.48
Sptbn4E9PX29 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12.03□□□□□ -0.48
Sptbn4E9PX29 Gm44069-201ENSMUST00000204898 506 ntBASIC12.03□□□□□ -0.48
Sptbn4E9PX29 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sptbn4E9PX29 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sptbn4E9PX29 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sptbn4E9PX29 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sptbn4E9PX29 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Sptbn4E9PX29 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sptbn4E9PX29 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Sptbn4E9PX29 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sptbn4E9PX29 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.48
Sptbn4E9PX29 Gm11450-201ENSMUST00000121144 333 ntBASIC12.02□□□□□ -0.48
Sptbn4E9PX29 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.02□□□□□ -0.48
Sptbn4E9PX29 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.02□□□□□ -0.48
Sptbn4E9PX29 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.02□□□□□ -0.48
Sptbn4E9PX29 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.02□□□□□ -0.48
Sptbn4E9PX29 Gm19640-201ENSMUST00000214849 464 ntBASIC12.02□□□□□ -0.48
Sptbn4E9PX29 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.48
Sptbn4E9PX29 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sptbn4E9PX29 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sptbn4E9PX29 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Sptbn4E9PX29 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC12.02□□□□□ -0.49
Sptbn4E9PX29 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC12.02□□□□□ -0.49
Sptbn4E9PX29 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sptbn4E9PX29 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Sptbn4E9PX29 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sptbn4E9PX29 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sptbn4E9PX29 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sptbn4E9PX29 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sptbn4E9PX29 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sptbn4E9PX29 Gm25043-201ENSMUST00000158604 212 ntBASIC12.02□□□□□ -0.49
Sptbn4E9PX29 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sptbn4E9PX29 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sptbn4E9PX29 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC12.02□□□□□ -0.49
Sptbn4E9PX29 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sptbn4E9PX29 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sptbn4E9PX29 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Sptbn4E9PX29 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sptbn4E9PX29 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sptbn4E9PX29 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sptbn4E9PX29 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Sptbn4E9PX29 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sptbn4E9PX29 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sptbn4E9PX29 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptbn4E9PX29 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sptbn4E9PX29 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptbn4E9PX29 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sptbn4E9PX29 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sptbn4E9PX29 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Sptbn4E9PX29 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.01□□□□□ -0.49
Sptbn4E9PX29 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.01□□□□□ -0.49
Sptbn4E9PX29 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptbn4E9PX29 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptbn4E9PX29 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptbn4E9PX29 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptbn4E9PX29 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sptbn4E9PX29 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptbn4E9PX29 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sptbn4E9PX29 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptbn4E9PX29 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.01□□□□□ -0.49
Sptbn4E9PX29 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptbn4E9PX29 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptbn4E9PX29 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Sptbn4E9PX29 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptbn4E9PX29 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptbn4E9PX29 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptbn4E9PX29 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sptbn4E9PX29 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptbn4E9PX29 Gm13296-201ENSMUST00000117854 997 ntBASIC12.01□□□□□ -0.49
Sptbn4E9PX29 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sptbn4E9PX29 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.01□□□□□ -0.49
Sptbn4E9PX29 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sptbn4E9PX29 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.01□□□□□ -0.49
Sptbn4E9PX29 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.01□□□□□ -0.49
Sptbn4E9PX29 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptbn4E9PX29 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Sptbn4E9PX29 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sptbn4E9PX29 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptbn4E9PX29 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sptbn4E9PX29 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sptbn4E9PX29 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Sptbn4E9PX29 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sptbn4E9PX29 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sptbn4E9PX29 Shroom3-211ENSMUST00000225438 5742 ntBASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms