Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Gm28043E0CXC2 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm28043E0CXC2 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm28043E0CXC2 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.57□□□□□ -0.24
Gm28043E0CXC2 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Gm28043E0CXC2 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm28043E0CXC2 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm28043E0CXC2 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm28043E0CXC2 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm28043E0CXC2 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm28043E0CXC2 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.57□□□□□ -0.24
Gm28043E0CXC2 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Gm28043E0CXC2 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Gm28043E0CXC2 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Gm28043E0CXC2 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.57□□□□□ -0.24
Gm28043E0CXC2 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Gm28043E0CXC2 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Gm28043E0CXC2 AA543401-201ENSMUST00000164248 1269 ntBASIC13.57□□□□□ -0.24
Gm28043E0CXC2 Gm27618-201ENSMUST00000183671 60 ntBASIC13.57□□□□□ -0.24
Gm28043E0CXC2 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.57□□□□□ -0.24
Gm28043E0CXC2 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.57□□□□□ -0.24
Gm28043E0CXC2 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Gm28043E0CXC2 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Gm28043E0CXC2 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.57□□□□□ -0.24
Gm28043E0CXC2 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.57□□□□□ -0.24
Gm28043E0CXC2 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm28043E0CXC2 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Gm28043E0CXC2 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm28043E0CXC2 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Gm28043E0CXC2 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm28043E0CXC2 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm28043E0CXC2 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Gm28043E0CXC2 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Gm28043E0CXC2 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Gm28043E0CXC2 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Gm28043E0CXC2 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Gm28043E0CXC2 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm28043E0CXC2 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Gm28043E0CXC2 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm28043E0CXC2 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm28043E0CXC2 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Gm28043E0CXC2 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.56□□□□□ -0.24
Gm28043E0CXC2 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm28043E0CXC2 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Gm28043E0CXC2 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm28043E0CXC2 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Gm28043E0CXC2 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.56□□□□□ -0.24
Gm28043E0CXC2 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Gm28043E0CXC2 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Gm28043E0CXC2 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Gm28043E0CXC2 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm28043E0CXC2 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm28043E0CXC2 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.56□□□□□ -0.24
Gm28043E0CXC2 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.56□□□□□ -0.24
Gm28043E0CXC2 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Gm28043E0CXC2 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.56□□□□□ -0.24
Gm28043E0CXC2 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.56□□□□□ -0.24
Gm28043E0CXC2 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm28043E0CXC2 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm28043E0CXC2 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm28043E0CXC2 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm28043E0CXC2 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Gm28043E0CXC2 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Gm28043E0CXC2 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm28043E0CXC2 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Gm28043E0CXC2 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm28043E0CXC2 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm28043E0CXC2 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Gm28043E0CXC2 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Gm28043E0CXC2 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.56□□□□□ -0.24
Gm28043E0CXC2 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Gm28043E0CXC2 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Gm28043E0CXC2 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Gm28043E0CXC2 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm28043E0CXC2 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm28043E0CXC2 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm28043E0CXC2 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Gm28043E0CXC2 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm28043E0CXC2 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Gm28043E0CXC2 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.55□□□□□ -0.24
Gm28043E0CXC2 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm28043E0CXC2 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Gm28043E0CXC2 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.55□□□□□ -0.24
Gm28043E0CXC2 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm28043E0CXC2 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Gm28043E0CXC2 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Gm28043E0CXC2 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm28043E0CXC2 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Gm28043E0CXC2 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Gm28043E0CXC2 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Gm28043E0CXC2 Gm15920-201ENSMUST00000118998 402 ntBASIC13.55□□□□□ -0.24
Gm28043E0CXC2 Gm13323-201ENSMUST00000120245 1151 ntBASIC13.55□□□□□ -0.24
Gm28043E0CXC2 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.55□□□□□ -0.24
Gm28043E0CXC2 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.55□□□□□ -0.24
Gm28043E0CXC2 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.55□□□□□ -0.24
Gm28043E0CXC2 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.55□□□□□ -0.24
Gm28043E0CXC2 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.55□□□□□ -0.24
Gm28043E0CXC2 Shd-206ENSMUST00000225145 998 ntBASIC13.55□□□□□ -0.24
Gm28043E0CXC2 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.55□□□□□ -0.24
Gm28043E0CXC2 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms