Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp42B2RQC2 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp42B2RQC2 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp42B2RQC2 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp42B2RQC2 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp42B2RQC2 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp42B2RQC2 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Usp42B2RQC2 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp42B2RQC2 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp42B2RQC2 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp42B2RQC2 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC15.78■□□□□ 0.12
Usp42B2RQC2 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC15.78■□□□□ 0.12
Usp42B2RQC2 Gm12138-201ENSMUST00000122180 951 ntBASIC15.78■□□□□ 0.12
Usp42B2RQC2 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Usp42B2RQC2 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp42B2RQC2 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC15.78■□□□□ 0.12
Usp42B2RQC2 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC15.78■□□□□ 0.12
Usp42B2RQC2 Gm9794-201ENSMUST00000202370 423 ntBASIC15.78■□□□□ 0.12
Usp42B2RQC2 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC15.78■□□□□ 0.12
Usp42B2RQC2 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.78■□□□□ 0.12
Usp42B2RQC2 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.78■□□□□ 0.12
Usp42B2RQC2 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp42B2RQC2 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp42B2RQC2 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Usp42B2RQC2 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp42B2RQC2 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp42B2RQC2 Gm10040-201ENSMUST00000080726 1662 ntBASIC15.78■□□□□ 0.12
Usp42B2RQC2 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Usp42B2RQC2 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Usp42B2RQC2 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp42B2RQC2 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Usp42B2RQC2 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp42B2RQC2 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Usp42B2RQC2 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Usp42B2RQC2 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Usp42B2RQC2 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Usp42B2RQC2 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Usp42B2RQC2 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Usp42B2RQC2 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Usp42B2RQC2 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Usp42B2RQC2 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Usp42B2RQC2 Gm5687-201ENSMUST00000118252 640 ntBASIC15.77■□□□□ 0.12
Usp42B2RQC2 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
Usp42B2RQC2 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC15.77■□□□□ 0.12
Usp42B2RQC2 AC150560.1-201ENSMUST00000227731 1187 ntBASIC15.77■□□□□ 0.12
Usp42B2RQC2 AC125117.1-201ENSMUST00000228121 468 ntBASIC15.77■□□□□ 0.12
Usp42B2RQC2 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Usp42B2RQC2 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Usp42B2RQC2 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Usp42B2RQC2 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Usp42B2RQC2 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Usp42B2RQC2 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Usp42B2RQC2 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Usp42B2RQC2 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Usp42B2RQC2 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Usp42B2RQC2 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Usp42B2RQC2 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Usp42B2RQC2 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Usp42B2RQC2 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Usp42B2RQC2 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Usp42B2RQC2 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Usp42B2RQC2 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Usp42B2RQC2 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.76■□□□□ 0.11
Usp42B2RQC2 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp42B2RQC2 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Usp42B2RQC2 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Usp42B2RQC2 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp42B2RQC2 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp42B2RQC2 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp42B2RQC2 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp42B2RQC2 Gm12928-201ENSMUST00000117115 573 ntBASIC15.76■□□□□ 0.11
Usp42B2RQC2 Gm12490-201ENSMUST00000120255 560 ntBASIC15.76■□□□□ 0.11
Usp42B2RQC2 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Usp42B2RQC2 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC15.76■□□□□ 0.11
Usp42B2RQC2 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Usp42B2RQC2 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC15.76■□□□□ 0.11
Usp42B2RQC2 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC15.76■□□□□ 0.11
Usp42B2RQC2 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC15.76■□□□□ 0.11
Usp42B2RQC2 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp42B2RQC2 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp42B2RQC2 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp42B2RQC2 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Usp42B2RQC2 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp42B2RQC2 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.76■□□□□ 0.11
Usp42B2RQC2 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp42B2RQC2 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp42B2RQC2 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp42B2RQC2 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Usp42B2RQC2 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Usp42B2RQC2 Gm6198-201ENSMUST00000191337 2929 ntBASIC15.76■□□□□ 0.11
Usp42B2RQC2 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp42B2RQC2 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp42B2RQC2 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp42B2RQC2 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Usp42B2RQC2 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp42B2RQC2 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Usp42B2RQC2 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Usp42B2RQC2 AC096628.2-201ENSMUST00000225443 1413 ntBASIC15.76■□□□□ 0.11
Usp42B2RQC2 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Usp42B2RQC2 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms