Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn7aB1AYL1 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn7aB1AYL1 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Scn7aB1AYL1 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn7aB1AYL1 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Scn7aB1AYL1 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn7aB1AYL1 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn7aB1AYL1 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Scn7aB1AYL1 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Scn7aB1AYL1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn7aB1AYL1 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC17.03■□□□□ 0.32
Scn7aB1AYL1 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Scn7aB1AYL1 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Scn7aB1AYL1 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn7aB1AYL1 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC17.03■□□□□ 0.32
Scn7aB1AYL1 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn7aB1AYL1 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn7aB1AYL1 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn7aB1AYL1 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn7aB1AYL1 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Scn7aB1AYL1 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn7aB1AYL1 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn7aB1AYL1 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn7aB1AYL1 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Scn7aB1AYL1 Gm4864-201ENSMUST00000219894 1461 ntBASIC17.02■□□□□ 0.32
Scn7aB1AYL1 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn7aB1AYL1 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn7aB1AYL1 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn7aB1AYL1 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn7aB1AYL1 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Scn7aB1AYL1 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn7aB1AYL1 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Scn7aB1AYL1 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Scn7aB1AYL1 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.02■□□□□ 0.32
Scn7aB1AYL1 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Scn7aB1AYL1 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Scn7aB1AYL1 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn7aB1AYL1 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC17.02■□□□□ 0.32
Scn7aB1AYL1 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Scn7aB1AYL1 Mir6927-201ENSMUST00000184494 71 ntBASIC17.02■□□□□ 0.32
Scn7aB1AYL1 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Scn7aB1AYL1 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC17.02■□□□□ 0.32
Scn7aB1AYL1 AC161537.1-201ENSMUST00000226199 1015 ntBASIC17.02■□□□□ 0.32
Scn7aB1AYL1 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn7aB1AYL1 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn7aB1AYL1 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn7aB1AYL1 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn7aB1AYL1 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scn7aB1AYL1 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Scn7aB1AYL1 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scn7aB1AYL1 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scn7aB1AYL1 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scn7aB1AYL1 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.31
Scn7aB1AYL1 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scn7aB1AYL1 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scn7aB1AYL1 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scn7aB1AYL1 Gm10782-202ENSMUST00000223775 1480 ntBASIC17.02■□□□□ 0.31
Scn7aB1AYL1 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Gm45691-201ENSMUST00000206905 1120 ntBASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Gm13097-201ENSMUST00000210722 397 ntBASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scn7aB1AYL1 AC108416.1-202ENSMUST00000228927 1201 ntBASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Gm6992-201ENSMUST00000217973 1607 ntBASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Scn7aB1AYL1 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn7aB1AYL1 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC17.01■□□□□ 0.31
Scn7aB1AYL1 Gm16570-201ENSMUST00000161951 436 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms