Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a4A2AX52 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a4A2AX52 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a4A2AX52 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a4A2AX52 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a4A2AX52 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Col6a4A2AX52 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Col6a4A2AX52 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Gm38144-201ENSMUST00000192790 465 ntBASIC11.38□□□□□ -0.59
Col6a4A2AX52 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.38□□□□□ -0.59
Col6a4A2AX52 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.38□□□□□ -0.59
Col6a4A2AX52 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.38□□□□□ -0.59
Col6a4A2AX52 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a4A2AX52 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.38□□□□□ -0.59
Col6a4A2AX52 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.38□□□□□ -0.59
Col6a4A2AX52 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a4A2AX52 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.38□□□□□ -0.59
Col6a4A2AX52 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.38□□□□□ -0.59
Col6a4A2AX52 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a4A2AX52 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Col6a4A2AX52 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a4A2AX52 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Col6a4A2AX52 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.37□□□□□ -0.59
Col6a4A2AX52 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.37□□□□□ -0.59
Col6a4A2AX52 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a4A2AX52 Gm16379-201ENSMUST00000161469 348 ntBASIC11.37□□□□□ -0.59
Col6a4A2AX52 Gm16505-201ENSMUST00000179981 232 ntBASIC11.37□□□□□ -0.59
Col6a4A2AX52 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC11.37□□□□□ -0.59
Col6a4A2AX52 Gm8762-201ENSMUST00000193486 339 ntBASIC11.37□□□□□ -0.59
Col6a4A2AX52 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.37□□□□□ -0.59
Col6a4A2AX52 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.37□□□□□ -0.59
Col6a4A2AX52 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a4A2AX52 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a4A2AX52 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Col6a4A2AX52 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a4A2AX52 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Col6a4A2AX52 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a4A2AX52 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a4A2AX52 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a4A2AX52 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a4A2AX52 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Col6a4A2AX52 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a4A2AX52 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.37□□□□□ -0.59
Col6a4A2AX52 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a4A2AX52 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a4A2AX52 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a4A2AX52 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a4A2AX52 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a4A2AX52 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.37□□□□□ -0.59
Col6a4A2AX52 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.37□□□□□ -0.59
Col6a4A2AX52 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a4A2AX52 Gm24255-201ENSMUST00000104481 128 ntBASIC11.37□□□□□ -0.59
Col6a4A2AX52 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC11.37□□□□□ -0.59
Col6a4A2AX52 Gm20482-202ENSMUST00000174729 825 ntBASIC11.37□□□□□ -0.59
Col6a4A2AX52 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.37□□□□□ -0.59
Col6a4A2AX52 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a4A2AX52 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a4A2AX52 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.37□□□□□ -0.59
Col6a4A2AX52 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Col6a4A2AX52 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms