Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Ccdc112A0AUP1 Gm15678-201ENSMUST00000117573 960 ntBASIC15.46■□□□□ 0.07
Ccdc112A0AUP1 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc112A0AUP1 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc112A0AUP1 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Ccdc112A0AUP1 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC15.46■□□□□ 0.07
Ccdc112A0AUP1 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc112A0AUP1 Gm3695-201ENSMUST00000087222 1009 ntBASIC15.46■□□□□ 0.07
Ccdc112A0AUP1 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Ccdc112A0AUP1 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc112A0AUP1 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc112A0AUP1 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Ccdc112A0AUP1 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc112A0AUP1 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.46■□□□□ 0.06
Ccdc112A0AUP1 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ccdc112A0AUP1 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ccdc112A0AUP1 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ccdc112A0AUP1 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ccdc112A0AUP1 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ccdc112A0AUP1 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC15.45■□□□□ 0.06
Ccdc112A0AUP1 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Ccdc112A0AUP1 Syt7-205ENSMUST00000224135 1557 ntBASIC15.45■□□□□ 0.06
Ccdc112A0AUP1 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc112A0AUP1 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc112A0AUP1 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Ccdc112A0AUP1 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc112A0AUP1 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc112A0AUP1 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc112A0AUP1 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc112A0AUP1 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc112A0AUP1 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Ccdc112A0AUP1 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc112A0AUP1 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc112A0AUP1 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC15.45■□□□□ 0.06
Ccdc112A0AUP1 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc112A0AUP1 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC15.45■□□□□ 0.06
Ccdc112A0AUP1 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc112A0AUP1 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc112A0AUP1 Gm15770-201ENSMUST00000117498 584 ntBASIC15.45■□□□□ 0.06
Ccdc112A0AUP1 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.45■□□□□ 0.06
Ccdc112A0AUP1 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC15.45■□□□□ 0.06
Ccdc112A0AUP1 Gm27680-201ENSMUST00000184192 160 ntBASIC15.45■□□□□ 0.06
Ccdc112A0AUP1 Gm27321-201ENSMUST00000185021 205 ntBASIC15.45■□□□□ 0.06
Ccdc112A0AUP1 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.45■□□□□ 0.06
Ccdc112A0AUP1 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc112A0AUP1 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc112A0AUP1 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc112A0AUP1 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc112A0AUP1 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc112A0AUP1 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Ccdc112A0AUP1 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc112A0AUP1 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc112A0AUP1 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc112A0AUP1 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc112A0AUP1 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc112A0AUP1 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Gm25948-201ENSMUST00000175334 112 ntBASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Gm27618-201ENSMUST00000183671 60 ntBASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Gm27430-201ENSMUST00000184585 107 ntBASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Gm44333-201ENSMUST00000197168 107 ntBASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Gm44344-201ENSMUST00000200287 129 ntBASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC15.44■□□□□ 0.06
Ccdc112A0AUP1 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms