Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm16198-201ENSMUST00000118766 670 ntBASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm5479-201ENSMUST00000160578 435 ntBASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm8584-201ENSMUST00000171982 758 ntBASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm27628-201ENSMUST00000184911 107 ntBASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm37230-201ENSMUST00000194491 818 ntBASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 AC123645.1-201ENSMUST00000228469 605 ntBASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm37411-201ENSMUST00000194180 2282 ntBASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm17971-201ENSMUST00000190239 806 ntBASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm5864-201ENSMUST00000202263 970 ntBASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 AC122840.1-201ENSMUST00000220915 3334 ntBASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms