Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Gm44719-201ENSMUST00000206404 149 ntBASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Gm44872-201ENSMUST00000207864 420 ntBASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Gm18934-201ENSMUST00000216671 1044 ntBASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 AC238811.1-201ENSMUST00000225302 441 ntBASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trav9n-2A0A0G2JDP3 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gm24420-201ENSMUST00000176676 59 ntBASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 AC131997.1-201ENSMUST00000228611 1229 ntBASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gm42690-201ENSMUST00000197921 1836 ntBASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Ntrk2-209ENSMUST00000225950 2640 ntBASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Gm6912-201ENSMUST00000117218 544 ntBASIC9.82□□□□□ -0.84
Trav9n-2A0A0G2JDP3 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms