Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb2S4R1M3 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H2afb2S4R1M3 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb2S4R1M3 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb2S4R1M3 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb2S4R1M3 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb2S4R1M3 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb2S4R1M3 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb2S4R1M3 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.54□□□□□ -0.24
H2afb2S4R1M3 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb2S4R1M3 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb2S4R1M3 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb2S4R1M3 Gm15321-201ENSMUST00000121290 288 ntBASIC13.54□□□□□ -0.24
H2afb2S4R1M3 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb2S4R1M3 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.54□□□□□ -0.24
H2afb2S4R1M3 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb2S4R1M3 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.54□□□□□ -0.24
H2afb2S4R1M3 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.54□□□□□ -0.24
H2afb2S4R1M3 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.54□□□□□ -0.24
H2afb2S4R1M3 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb2S4R1M3 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb2S4R1M3 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb2S4R1M3 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb2S4R1M3 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb2S4R1M3 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb2S4R1M3 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb2S4R1M3 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb2S4R1M3 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.54□□□□□ -0.24
H2afb2S4R1M3 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb2S4R1M3 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb2S4R1M3 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb2S4R1M3 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
H2afb2S4R1M3 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb2S4R1M3 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb2S4R1M3 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb2S4R1M3 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb2S4R1M3 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.53□□□□□ -0.24
H2afb2S4R1M3 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb2S4R1M3 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb2S4R1M3 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb2S4R1M3 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
H2afb2S4R1M3 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb2S4R1M3 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.53□□□□□ -0.24
H2afb2S4R1M3 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb2S4R1M3 Gm14057-201ENSMUST00000120631 482 ntBASIC13.53□□□□□ -0.24
H2afb2S4R1M3 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb2S4R1M3 Gm5279-201ENSMUST00000199575 745 ntBASIC13.53□□□□□ -0.24
H2afb2S4R1M3 Grk6-205ENSMUST00000224653 2976 ntBASIC13.53□□□□□ -0.24
H2afb2S4R1M3 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.53□□□□□ -0.24
H2afb2S4R1M3 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb2S4R1M3 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb2S4R1M3 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb2S4R1M3 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb2S4R1M3 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb2S4R1M3 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb2S4R1M3 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb2S4R1M3 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
H2afb2S4R1M3 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb2S4R1M3 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb2S4R1M3 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb2S4R1M3 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
H2afb2S4R1M3 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb2S4R1M3 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb2S4R1M3 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb2S4R1M3 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb2S4R1M3 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.53□□□□□ -0.24
H2afb2S4R1M3 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb2S4R1M3 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
H2afb2S4R1M3 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
H2afb2S4R1M3 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
H2afb2S4R1M3 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
H2afb2S4R1M3 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.24
H2afb2S4R1M3 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
H2afb2S4R1M3 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
H2afb2S4R1M3 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
H2afb2S4R1M3 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
H2afb2S4R1M3 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
H2afb2S4R1M3 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
H2afb2S4R1M3 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
H2afb2S4R1M3 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
H2afb2S4R1M3 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.52□□□□□ -0.24
H2afb2S4R1M3 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
H2afb2S4R1M3 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
H2afb2S4R1M3 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.52□□□□□ -0.25
H2afb2S4R1M3 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
H2afb2S4R1M3 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
H2afb2S4R1M3 Gm28760-201ENSMUST00000185995 736 ntBASIC13.52□□□□□ -0.25
H2afb2S4R1M3 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.52□□□□□ -0.25
H2afb2S4R1M3 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
H2afb2S4R1M3 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
H2afb2S4R1M3 Gm17330-201ENSMUST00000221047 165 ntBASIC13.52□□□□□ -0.25
H2afb2S4R1M3 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
H2afb2S4R1M3 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
H2afb2S4R1M3 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.52□□□□□ -0.25
H2afb2S4R1M3 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
H2afb2S4R1M3 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
H2afb2S4R1M3 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
H2afb2S4R1M3 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
H2afb2S4R1M3 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
H2afb2S4R1M3 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms