Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn6Q9Z262 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Cldn6Q9Z262 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn6Q9Z262 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.68□□□□□ -0.38
Cldn6Q9Z262 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn6Q9Z262 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn6Q9Z262 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cldn6Q9Z262 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn6Q9Z262 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn6Q9Z262 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.68□□□□□ -0.38
Cldn6Q9Z262 Gm14057-201ENSMUST00000120631 482 ntBASIC12.68□□□□□ -0.38
Cldn6Q9Z262 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Cldn6Q9Z262 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Cldn6Q9Z262 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cldn6Q9Z262 Gm5279-201ENSMUST00000199575 745 ntBASIC12.68□□□□□ -0.38
Cldn6Q9Z262 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.68□□□□□ -0.38
Cldn6Q9Z262 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn6Q9Z262 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn6Q9Z262 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn6Q9Z262 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn6Q9Z262 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn6Q9Z262 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cldn6Q9Z262 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn6Q9Z262 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn6Q9Z262 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn6Q9Z262 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cldn6Q9Z262 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn6Q9Z262 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Cldn6Q9Z262 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.68□□□□□ -0.38
Cldn6Q9Z262 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn6Q9Z262 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn6Q9Z262 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldn6Q9Z262 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Gm25925-201ENSMUST00000158314 306 ntBASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Gm28760-201ENSMUST00000185995 736 ntBASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Gm43094-201ENSMUST00000196549 921 ntBASIC12.67□□□□□ -0.38
Cldn6Q9Z262 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.67□□□□□ -0.38
Cldn6Q9Z262 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.67□□□□□ -0.38
Cldn6Q9Z262 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldn6Q9Z262 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn6Q9Z262 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn6Q9Z262 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn6Q9Z262 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cldn6Q9Z262 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn6Q9Z262 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.66□□□□□ -0.38
Cldn6Q9Z262 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.66□□□□□ -0.38
Cldn6Q9Z262 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn6Q9Z262 Gm22189-201ENSMUST00000103822 86 ntBASIC12.66□□□□□ -0.38
Cldn6Q9Z262 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldn6Q9Z262 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
Cldn6Q9Z262 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.66□□□□□ -0.38
Cldn6Q9Z262 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms