Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn13Q9Z0S4 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cldn13Q9Z0S4 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn13Q9Z0S4 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn13Q9Z0S4 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn13Q9Z0S4 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn13Q9Z0S4 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn13Q9Z0S4 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.1□□□□□ -0.47
Cldn13Q9Z0S4 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.1□□□□□ -0.47
Cldn13Q9Z0S4 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn13Q9Z0S4 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.1□□□□□ -0.47
Cldn13Q9Z0S4 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn13Q9Z0S4 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn13Q9Z0S4 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn13Q9Z0S4 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldn13Q9Z0S4 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.1□□□□□ -0.47
Cldn13Q9Z0S4 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 Gm12859-201ENSMUST00000117834 427 ntBASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldn13Q9Z0S4 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.47
Cldn13Q9Z0S4 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Cldn13Q9Z0S4 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cldn13Q9Z0S4 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.08□□□□□ -0.47
Cldn13Q9Z0S4 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn13Q9Z0S4 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.08□□□□□ -0.48
Cldn13Q9Z0S4 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.08□□□□□ -0.48
Cldn13Q9Z0S4 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn13Q9Z0S4 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn13Q9Z0S4 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.08□□□□□ -0.48
Cldn13Q9Z0S4 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn13Q9Z0S4 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn13Q9Z0S4 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn13Q9Z0S4 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn13Q9Z0S4 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Cldn13Q9Z0S4 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn13Q9Z0S4 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Cldn13Q9Z0S4 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.08□□□□□ -0.48
Cldn13Q9Z0S4 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn13Q9Z0S4 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.08□□□□□ -0.48
Cldn13Q9Z0S4 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.08□□□□□ -0.48
Cldn13Q9Z0S4 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn13Q9Z0S4 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.08□□□□□ -0.48
Cldn13Q9Z0S4 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cldn13Q9Z0S4 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn13Q9Z0S4 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cldn13Q9Z0S4 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn13Q9Z0S4 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.08□□□□□ -0.48
Cldn13Q9Z0S4 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.08□□□□□ -0.48
Cldn13Q9Z0S4 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Cldn13Q9Z0S4 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.08□□□□□ -0.48
Cldn13Q9Z0S4 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn13Q9Z0S4 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn13Q9Z0S4 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn13Q9Z0S4 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn13Q9Z0S4 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn13Q9Z0S4 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.08□□□□□ -0.48
Cldn13Q9Z0S4 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn13Q9Z0S4 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cldn13Q9Z0S4 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn13Q9Z0S4 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldn13Q9Z0S4 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms