Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Gm7222-201ENSMUST00000117512 906 ntBASIC11.43□□□□□ -0.58
Six6Q9QZ28 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC11.43□□□□□ -0.58
Six6Q9QZ28 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC11.43□□□□□ -0.58
Six6Q9QZ28 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC11.43□□□□□ -0.58
Six6Q9QZ28 Gm10154-201ENSMUST00000084445 354 ntBASIC11.43□□□□□ -0.58
Six6Q9QZ28 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six6Q9QZ28 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Six6Q9QZ28 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.43□□□□□ -0.58
Six6Q9QZ28 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six6Q9QZ28 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six6Q9QZ28 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six6Q9QZ28 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six6Q9QZ28 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Six6Q9QZ28 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Six6Q9QZ28 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.42□□□□□ -0.58
Six6Q9QZ28 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Six6Q9QZ28 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six6Q9QZ28 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.42□□□□□ -0.58
Six6Q9QZ28 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Six6Q9QZ28 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six6Q9QZ28 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six6Q9QZ28 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.42□□□□□ -0.58
Six6Q9QZ28 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six6Q9QZ28 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six6Q9QZ28 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six6Q9QZ28 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC11.42□□□□□ -0.58
Six6Q9QZ28 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC11.42□□□□□ -0.58
Six6Q9QZ28 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six6Q9QZ28 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six6Q9QZ28 Gm27704-201ENSMUST00000185094 107 ntBASIC11.42□□□□□ -0.58
Six6Q9QZ28 Gm44357-201ENSMUST00000195897 142 ntBASIC11.42□□□□□ -0.58
Six6Q9QZ28 Gm19658-201ENSMUST00000196231 138 ntBASIC11.42□□□□□ -0.58
Six6Q9QZ28 Gm44367-201ENSMUST00000196836 138 ntBASIC11.42□□□□□ -0.58
Six6Q9QZ28 Gm44350-201ENSMUST00000197197 138 ntBASIC11.42□□□□□ -0.58
Six6Q9QZ28 Gm44390-201ENSMUST00000197533 144 ntBASIC11.42□□□□□ -0.58
Six6Q9QZ28 Gm44313-201ENSMUST00000198018 138 ntBASIC11.42□□□□□ -0.58
Six6Q9QZ28 Gm44486-201ENSMUST00000198508 138 ntBASIC11.42□□□□□ -0.58
Six6Q9QZ28 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Six6Q9QZ28 Gm44314-201ENSMUST00000199263 138 ntBASIC11.42□□□□□ -0.58
Six6Q9QZ28 Gm44394-201ENSMUST00000199558 138 ntBASIC11.42□□□□□ -0.58
Six6Q9QZ28 Gm44484-201ENSMUST00000199873 138 ntBASIC11.42□□□□□ -0.58
Six6Q9QZ28 Gm44466-201ENSMUST00000200264 138 ntBASIC11.42□□□□□ -0.58
Six6Q9QZ28 Gm44359-201ENSMUST00000200671 138 ntBASIC11.42□□□□□ -0.58
Six6Q9QZ28 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC11.42□□□□□ -0.58
Six6Q9QZ28 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six6Q9QZ28 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six6Q9QZ28 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Six6Q9QZ28 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC11.42□□□□□ -0.58
Six6Q9QZ28 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six6Q9QZ28 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six6Q9QZ28 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six6Q9QZ28 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six6Q9QZ28 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Six6Q9QZ28 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Six6Q9QZ28 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six6Q9QZ28 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six6Q9QZ28 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Six6Q9QZ28 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.42□□□□□ -0.58
Six6Q9QZ28 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six6Q9QZ28 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six6Q9QZ28 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Six6Q9QZ28 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Six6Q9QZ28 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Six6Q9QZ28 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Six6Q9QZ28 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.41□□□□□ -0.58
Six6Q9QZ28 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Six6Q9QZ28 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Six6Q9QZ28 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Six6Q9QZ28 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Six6Q9QZ28 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.41□□□□□ -0.58
Six6Q9QZ28 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Six6Q9QZ28 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Six6Q9QZ28 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms