Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl28Q9JIL2 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ccl28Q9JIL2 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl28Q9JIL2 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl28Q9JIL2 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC10.94□□□□□ -0.66
Ccl28Q9JIL2 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl28Q9JIL2 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl28Q9JIL2 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl28Q9JIL2 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Ccl28Q9JIL2 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC10.94□□□□□ -0.66
Ccl28Q9JIL2 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Ccl28Q9JIL2 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Ccl28Q9JIL2 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Ccl28Q9JIL2 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Ccl28Q9JIL2 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Ccl28Q9JIL2 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl28Q9JIL2 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC10.94□□□□□ -0.66
Ccl28Q9JIL2 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC10.94□□□□□ -0.66
Ccl28Q9JIL2 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl28Q9JIL2 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC10.94□□□□□ -0.66
Ccl28Q9JIL2 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Ccl28Q9JIL2 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Ccl28Q9JIL2 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl28Q9JIL2 Gm37644-201ENSMUST00000192190 2270 ntBASIC10.94□□□□□ -0.66
Ccl28Q9JIL2 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl28Q9JIL2 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Ccl28Q9JIL2 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl28Q9JIL2 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl28Q9JIL2 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl28Q9JIL2 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl28Q9JIL2 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC10.94□□□□□ -0.66
Ccl28Q9JIL2 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC10.94□□□□□ -0.66
Ccl28Q9JIL2 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl28Q9JIL2 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl28Q9JIL2 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl28Q9JIL2 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl28Q9JIL2 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ccl28Q9JIL2 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC10.94□□□□□ -0.66
Ccl28Q9JIL2 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Ntrk2-208ENSMUST00000225583 2719 ntBASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Gm15653-201ENSMUST00000119247 907 ntBASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Gm11557-201ENSMUST00000120200 1008 ntBASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Gm15693-201ENSMUST00000120470 637 ntBASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Gm25948-201ENSMUST00000175334 112 ntBASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Gm8927-201ENSMUST00000181978 981 ntBASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Gm27533-201ENSMUST00000183800 152 ntBASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Gm27430-201ENSMUST00000184585 107 ntBASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Gm44333-201ENSMUST00000197168 107 ntBASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 AC153872.1-201ENSMUST00000199539 128 ntBASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Gm4971-201ENSMUST00000205991 1108 ntBASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Gm9229-201ENSMUST00000222777 126 ntBASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 AC156016.3-201ENSMUST00000228623 344 ntBASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Gm3222-201ENSMUST00000071282 990 ntBASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Ccl28Q9JIL2 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms