Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Tubb3Q9ERD7 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tubb3Q9ERD7 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tubb3Q9ERD7 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tubb3Q9ERD7 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tubb3Q9ERD7 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tubb3Q9ERD7 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tubb3Q9ERD7 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Tubb3Q9ERD7 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.46□□□□□ -0.25
Tubb3Q9ERD7 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Tubb3Q9ERD7 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.46□□□□□ -0.25
Tubb3Q9ERD7 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tubb3Q9ERD7 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tubb3Q9ERD7 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tubb3Q9ERD7 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
Tubb3Q9ERD7 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tubb3Q9ERD7 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Tubb3Q9ERD7 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tubb3Q9ERD7 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.46□□□□□ -0.25
Tubb3Q9ERD7 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Tubb3Q9ERD7 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Tubb3Q9ERD7 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tubb3Q9ERD7 Gm15393-201ENSMUST00000120499 219 ntBASIC13.46□□□□□ -0.25
Tubb3Q9ERD7 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.46□□□□□ -0.25
Tubb3Q9ERD7 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tubb3Q9ERD7 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tubb3Q9ERD7 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.46□□□□□ -0.25
Tubb3Q9ERD7 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.46□□□□□ -0.25
Tubb3Q9ERD7 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tubb3Q9ERD7 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Tubb3Q9ERD7 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tubb3Q9ERD7 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Tubb3Q9ERD7 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tubb3Q9ERD7 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tubb3Q9ERD7 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tubb3Q9ERD7 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Tubb3Q9ERD7 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Tubb3Q9ERD7 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Tubb3Q9ERD7 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tubb3Q9ERD7 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tubb3Q9ERD7 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tubb3Q9ERD7 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.45□□□□□ -0.26
Tubb3Q9ERD7 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tubb3Q9ERD7 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Tubb3Q9ERD7 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Tubb3Q9ERD7 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tubb3Q9ERD7 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Tubb3Q9ERD7 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Tubb3Q9ERD7 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.44□□□□□ -0.26
Tubb3Q9ERD7 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tubb3Q9ERD7 Gm12585-201ENSMUST00000117307 290 ntBASIC13.44□□□□□ -0.26
Tubb3Q9ERD7 Gm15460-201ENSMUST00000118147 391 ntBASIC13.44□□□□□ -0.26
Tubb3Q9ERD7 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Tubb3Q9ERD7 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Tubb3Q9ERD7 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.44□□□□□ -0.26
Tubb3Q9ERD7 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Tubb3Q9ERD7 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.44□□□□□ -0.26
Tubb3Q9ERD7 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms