Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.82□□□□□ -0.2
Nkx2-4Q9EQM3 Gm11637-201ENSMUST00000120601 592 ntBASIC13.82□□□□□ -0.2
Nkx2-4Q9EQM3 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.82□□□□□ -0.2
Nkx2-4Q9EQM3 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.82□□□□□ -0.2
Nkx2-4Q9EQM3 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-4Q9EQM3 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-4Q9EQM3 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.82□□□□□ -0.2
Nkx2-4Q9EQM3 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-4Q9EQM3 Gm43830-201ENSMUST00000198760 1067 ntBASIC13.82□□□□□ -0.2
Nkx2-4Q9EQM3 Gm8099-201ENSMUST00000200510 742 ntBASIC13.82□□□□□ -0.2
Nkx2-4Q9EQM3 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC13.82□□□□□ -0.2
Nkx2-4Q9EQM3 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Nkx2-4Q9EQM3 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.82□□□□□ -0.2
Nkx2-4Q9EQM3 Gm9826-201ENSMUST00000029124 1299 ntBASIC13.82□□□□□ -0.2
Nkx2-4Q9EQM3 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-4Q9EQM3 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-4Q9EQM3 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-4Q9EQM3 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-4Q9EQM3 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.82□□□□□ -0.2
Nkx2-4Q9EQM3 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-4Q9EQM3 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-4Q9EQM3 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-4Q9EQM3 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-4Q9EQM3 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.82□□□□□ -0.2
Nkx2-4Q9EQM3 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-4Q9EQM3 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-4Q9EQM3 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Nkx2-4Q9EQM3 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-4Q9EQM3 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Nkx2-4Q9EQM3 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.81□□□□□ -0.2
Nkx2-4Q9EQM3 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.81□□□□□ -0.2
Nkx2-4Q9EQM3 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-4Q9EQM3 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.81□□□□□ -0.2
Nkx2-4Q9EQM3 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-4Q9EQM3 CT009718.3-201ENSMUST00000221116 367 ntBASIC13.81□□□□□ -0.2
Nkx2-4Q9EQM3 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Nkx2-4Q9EQM3 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.81□□□□□ -0.2
Nkx2-4Q9EQM3 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-4Q9EQM3 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-4Q9EQM3 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Nkx2-4Q9EQM3 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-4Q9EQM3 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-4Q9EQM3 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-4Q9EQM3 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.81□□□□□ -0.2
Nkx2-4Q9EQM3 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Nkx2-4Q9EQM3 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-4Q9EQM3 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-4Q9EQM3 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-4Q9EQM3 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-4Q9EQM3 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Nkx2-4Q9EQM3 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.81□□□□□ -0.2
Nkx2-4Q9EQM3 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-4Q9EQM3 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.81□□□□□ -0.2
Nkx2-4Q9EQM3 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-4Q9EQM3 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.81□□□□□ -0.2
Nkx2-4Q9EQM3 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nkx2-4Q9EQM3 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 Gm7857-201ENSMUST00000117957 358 ntBASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 Gm14130-201ENSMUST00000118417 987 ntBASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 Gm13097-201ENSMUST00000210722 397 ntBASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx2-4Q9EQM3 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.79□□□□□ -0.2
Nkx2-4Q9EQM3 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms