Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Gm15770-201ENSMUST00000117498 584 ntBASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Gm15376-201ENSMUST00000122258 783 ntBASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.11□□□□□ -0.15
Cpne8Q9DC53 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne8Q9DC53 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cpne8Q9DC53 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne8Q9DC53 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Gm12403-201ENSMUST00000121384 959 ntBASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.1□□□□□ -0.15
Cpne8Q9DC53 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne8Q9DC53 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cpne8Q9DC53 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne8Q9DC53 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne8Q9DC53 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne8Q9DC53 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne8Q9DC53 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne8Q9DC53 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne8Q9DC53 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cpne8Q9DC53 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne8Q9DC53 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cpne8Q9DC53 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne8Q9DC53 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne8Q9DC53 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne8Q9DC53 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cpne8Q9DC53 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne8Q9DC53 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne8Q9DC53 Gm15678-201ENSMUST00000117573 960 ntBASIC14.09□□□□□ -0.15
Cpne8Q9DC53 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Cpne8Q9DC53 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne8Q9DC53 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne8Q9DC53 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cpne8Q9DC53 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms