Protein–RNA interactions for Protein: Q9D8D0

Tnfrsf13c, Tumor necrosis factor receptor superfamily member 13C, mousemouse

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13cQ9D8D0 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tnfrsf13cQ9D8D0 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Tnfrsf13cQ9D8D0 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tnfrsf13cQ9D8D0 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Tnfrsf13cQ9D8D0 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tnfrsf13cQ9D8D0 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tnfrsf13cQ9D8D0 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Tnfrsf13cQ9D8D0 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf13cQ9D8D0 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf13cQ9D8D0 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
Tnfrsf13cQ9D8D0 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf13cQ9D8D0 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf13cQ9D8D0 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf13cQ9D8D0 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf13cQ9D8D0 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf13cQ9D8D0 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf13cQ9D8D0 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf13cQ9D8D0 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf13cQ9D8D0 Gm45242-201ENSMUST00000210666 2129 ntBASIC10.54□□□□□ -0.72
Tnfrsf13cQ9D8D0 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC10.54□□□□□ -0.72
Tnfrsf13cQ9D8D0 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf13cQ9D8D0 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf13cQ9D8D0 Gm6973-201ENSMUST00000117080 721 ntBASIC10.54□□□□□ -0.72
Tnfrsf13cQ9D8D0 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
Tnfrsf13cQ9D8D0 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf13cQ9D8D0 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Tnfrsf13cQ9D8D0 Gm44719-201ENSMUST00000206404 149 ntBASIC10.54□□□□□ -0.72
Tnfrsf13cQ9D8D0 AC139350.3-201ENSMUST00000226151 420 ntBASIC10.54□□□□□ -0.72
Tnfrsf13cQ9D8D0 Psmb5-202ENSMUST00000227257 622 ntBASIC10.54□□□□□ -0.72
Tnfrsf13cQ9D8D0 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf13cQ9D8D0 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf13cQ9D8D0 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
Tnfrsf13cQ9D8D0 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
Tnfrsf13cQ9D8D0 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Tnfrsf13cQ9D8D0 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf13cQ9D8D0 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf13cQ9D8D0 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf13cQ9D8D0 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf13cQ9D8D0 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf13cQ9D8D0 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf13cQ9D8D0 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf13cQ9D8D0 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf13cQ9D8D0 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf13cQ9D8D0 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Tnfrsf13cQ9D8D0 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Gm43423-201ENSMUST00000198390 2094 ntBASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Gm17271-201ENSMUST00000165535 355 ntBASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Rpph1-201ENSMUST00000175096 319 ntBASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 AC159295.1-201ENSMUST00000225326 940 ntBASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 CT030704.2-201ENSMUST00000228887 494 ntBASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Tnfrsf13cQ9D8D0 Gm18263-201ENSMUST00000220846 1928 ntBASIC10.52□□□□□ -0.72
Tnfrsf13cQ9D8D0 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tnfrsf13cQ9D8D0 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Tnfrsf13cQ9D8D0 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
Tnfrsf13cQ9D8D0 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tnfrsf13cQ9D8D0 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tnfrsf13cQ9D8D0 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tnfrsf13cQ9D8D0 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Tnfrsf13cQ9D8D0 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tnfrsf13cQ9D8D0 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tnfrsf13cQ9D8D0 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tnfrsf13cQ9D8D0 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms