Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 Gm14928-201ENSMUST00000120198 477 ntBASIC14.38□□□□□ -0.11
Gm3404Q9D506 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.38□□□□□ -0.11
Gm3404Q9D506 Gm23984-201ENSMUST00000157139 203 ntBASIC14.38□□□□□ -0.11
Gm3404Q9D506 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Gm3404Q9D506 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.38□□□□□ -0.11
Gm3404Q9D506 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.38□□□□□ -0.11
Gm3404Q9D506 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.38□□□□□ -0.11
Gm3404Q9D506 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3404Q9D506 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Gm3404Q9D506 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3404Q9D506 Gm15823-201ENSMUST00000064305 670 ntBASIC14.38□□□□□ -0.11
Gm3404Q9D506 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.38□□□□□ -0.11
Gm3404Q9D506 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3404Q9D506 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3404Q9D506 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3404Q9D506 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3404Q9D506 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3404Q9D506 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Gm3404Q9D506 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Gm3404Q9D506 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3404Q9D506 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Gm3404Q9D506 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3404Q9D506 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3404Q9D506 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3404Q9D506 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3404Q9D506 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3404Q9D506 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3404Q9D506 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3404Q9D506 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.37□□□□□ -0.11
Gm3404Q9D506 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3404Q9D506 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3404Q9D506 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3404Q9D506 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Gm3404Q9D506 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3404Q9D506 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3404Q9D506 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3404Q9D506 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.37□□□□□ -0.11
Gm3404Q9D506 Gm12091-201ENSMUST00000146791 830 ntBASIC14.37□□□□□ -0.11
Gm3404Q9D506 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3404Q9D506 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Gm3404Q9D506 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.37□□□□□ -0.11
Gm3404Q9D506 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3404Q9D506 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3404Q9D506 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3404Q9D506 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Gm3404Q9D506 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3404Q9D506 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3404Q9D506 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3404Q9D506 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.37□□□□□ -0.11
Gm3404Q9D506 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3404Q9D506 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3404Q9D506 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3404Q9D506 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3404Q9D506 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.37□□□□□ -0.11
Gm3404Q9D506 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3404Q9D506 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3404Q9D506 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3404Q9D506 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Gm3404Q9D506 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gm3404Q9D506 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Gm3404Q9D506 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3404Q9D506 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3404Q9D506 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.36□□□□□ -0.11
Gm3404Q9D506 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3404Q9D506 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3404Q9D506 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Gm3404Q9D506 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3404Q9D506 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3404Q9D506 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3404Q9D506 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3404Q9D506 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Gm3404Q9D506 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.36□□□□□ -0.11
Gm3404Q9D506 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3404Q9D506 Gm26464-201ENSMUST00000157094 305 ntBASIC14.36□□□□□ -0.11
Gm3404Q9D506 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.36□□□□□ -0.11
Gm3404Q9D506 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.36□□□□□ -0.11
Gm3404Q9D506 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.36□□□□□ -0.11
Gm3404Q9D506 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Gm3404Q9D506 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Gm3404Q9D506 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3404Q9D506 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3404Q9D506 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3404Q9D506 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3404Q9D506 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3404Q9D506 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3404Q9D506 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm3404Q9D506 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3404Q9D506 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Gm3404Q9D506 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3404Q9D506 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3404Q9D506 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3404Q9D506 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3404Q9D506 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.35□□□□□ -0.11
Gm3404Q9D506 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3404Q9D506 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.35□□□□□ -0.11
Gm3404Q9D506 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Gm3404Q9D506 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.35□□□□□ -0.11
Gm3404Q9D506 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3404Q9D506 Gm18307-201ENSMUST00000206864 949 ntBASIC14.35□□□□□ -0.11
Gm3404Q9D506 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms