Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Mrpl55Q9CZ83 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Gm7049-201ENSMUST00000223520 1712 ntBASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Gm22065-201ENSMUST00000103753 110 ntBASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Gm22066-201ENSMUST00000103761 110 ntBASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Gm24932-201ENSMUST00000103763 110 ntBASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Gm24115-201ENSMUST00000103799 110 ntBASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Gm22190-201ENSMUST00000103827 110 ntBASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Gm22191-201ENSMUST00000103831 110 ntBASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Gm24721-201ENSMUST00000103849 110 ntBASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Gm28018-201ENSMUST00000103869 110 ntBASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Gm26399-201ENSMUST00000103937 110 ntBASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Gm25349-201ENSMUST00000177728 110 ntBASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Gm23616-201ENSMUST00000177797 110 ntBASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Gm25871-201ENSMUST00000177816 110 ntBASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Gm24752-201ENSMUST00000178240 110 ntBASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Gm24496-201ENSMUST00000178287 110 ntBASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Gm25649-201ENSMUST00000178476 110 ntBASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Gm25548-201ENSMUST00000178681 110 ntBASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Gm23147-201ENSMUST00000178841 110 ntBASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Gm26095-201ENSMUST00000179270 110 ntBASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Gm22171-201ENSMUST00000179283 110 ntBASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Gm23936-201ENSMUST00000179354 110 ntBASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Gm22619-201ENSMUST00000179516 110 ntBASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Gm25255-201ENSMUST00000179579 110 ntBASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Gm24755-201ENSMUST00000179691 110 ntBASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Gm26506-201ENSMUST00000179692 110 ntBASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Gm25086-201ENSMUST00000179931 110 ntBASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Gm23243-201ENSMUST00000180047 110 ntBASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Gm24659-201ENSMUST00000180212 110 ntBASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Gm24169-201ENSMUST00000180244 110 ntBASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Gm23689-201ENSMUST00000180354 110 ntBASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Gm27359-201ENSMUST00000184153 110 ntBASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Gm27785-201ENSMUST00000184268 110 ntBASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Gm27466-201ENSMUST00000184396 110 ntBASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Gm27703-201ENSMUST00000184836 110 ntBASIC9□□□□□ -0.97
Mrpl55Q9CZ83 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 AC131743.5-201ENSMUST00000220775 1618 ntBASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 CT025626.1-201ENSMUST00000223735 1455 ntBASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC9□□□□□ -0.97
Mrpl55Q9CZ83 Gm27196-201ENSMUST00000184787 2582 ntBASIC9□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms